Chromobacterium paludis: FYK34_01855
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Entry
FYK34_01855 CDS
T06224
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00260
Glycine, serine and threonine metabolism
chrm00460
Cyanoamino acid metabolism
chrm00630
Glyoxylate and dicarboxylate metabolism
chrm00670
One carbon pool by folate
chrm00680
Methane metabolism
chrm01100
Metabolic pathways
chrm01110
Biosynthesis of secondary metabolites
chrm01120
Microbial metabolism in diverse environments
chrm01200
Carbon metabolism
chrm01230
Biosynthesis of amino acids
chrm01240
Biosynthesis of cofactors
chrm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FYK34_01855
09102 Energy metabolism
00680 Methane metabolism
FYK34_01855
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FYK34_01855
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FYK34_01855
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FYK34_01855
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FYK34_01855
Enzymes [BR:
chrm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FYK34_01855
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QEL54409
UniProt:
A0A5C1DEN0
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All DBs
Position
392136..393383
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AA seq
415 aa
AA seq
DB search
MFAADQTIAKFDPELAAAIAAECQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRFYGGCEHVDVVEQLAIDRVKQLFGAEYANVQPHSGSQANQAVYFSILKPGDTVMGMN
LGHGGHLTHGSPANLSGKMFNIVAYGLNDKEEIDYDDMERVAMETKPKLIIGGASAYALR
FDFERMGQIAKKVGAYFMVDMAHYAGLVAAGLYPNPVPHADFVTSTTHKTLRGPRGGIIL
ARAEFEKSINSNVFPTLQGGPLEHVIAAKAVAFKEALQPEFKAYQEQVIKNAAIMAKTLA
ERGLRIVSGRTESHVFLVDLRAKGLTGKQADSLLGRAHITVNKNAIPNDPETPFVTSGIR
IGSPAITTRGFKEAEAIEVANLVADVLDNPNDDALIARVAEKATALCHRFPVYAK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgctgaccagacgatcgccaaattcgaccccgaactcgccgccgccattgcc
gcggaatgccaacgccaggaagatcacatcgagctgatcgcctcggaaaactacaccagc
ccggccgtcatggaagcccaaggctcccagctgaccaacaagtacgccgaaggttacccg
ggcaagcgcttctacggcggttgtgagcatgtggacgtcgttgagcaattggccatcgac
cgcgtcaagcagctgttcggcgcggaatacgccaacgtccagccgcactccggctcccag
gccaatcaggcggtgtacttctccatcctgaagccgggcgacacggtgatgggcatgaat
ctgggccacggcggccacctgacccacggctccccggccaacctgtccggcaagatgttc
aacatcgtcgcctacggcctgaacgacaaggaagaaatcgactacgacgacatggagcgc
gtggcgatggaaaccaagcccaagctgatcatcggcggcgcatccgcctacgccttgcgc
ttcgacttcgagcgcatgggtcagatcgccaagaaagtaggcgcttacttcatggtggac
atggctcactacgccggcctggtggccgcgggcctgtacccgaacccggtgccgcacgcc
gacttcgtgacctccaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gcccgcgcggagttcgagaagagcatcaacagcaatgtgttcccgacgctgcaaggcggc
ccgctggagcatgtgatcgccgccaaggccgtcgccttcaaggaagcgctgcagccggaa
ttcaaggcgtatcaggaacaagtgatcaagaacgccgccatcatggccaagaccctggcc
gagcgcggcctgcgcatcgtgtccggccgcaccgagagccacgtgttcctggtcgacctg
cgcgccaagggcctgaccggcaagcaagccgactcgctgctgggccgcgcccacatcacg
gtcaacaagaacgccatcccgaacgatccggaaaccccgttcgtcacctccggcatccgc
atcggctccccggccatcaccacccgcggcttcaaggaagccgaggccatcgaagtggcg
aatctggtcgccgacgtgctggacaacccgaacgacgacgcgttgatcgcccgcgttgcc
gagaaggccaccgcgctgtgccaccgtttcccggtgtacgccaagtaa
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