Chromobacterium paludis: FYK34_02255
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Entry
FYK34_02255 CDS
T06224
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrm03009
]
FYK34_02255 (rimO)
Enzymes [BR:
chrm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FYK34_02255 (rimO)
Ribosome biogenesis [BR:
chrm03009
]
Prokaryotic type
ribosomal protein modification factors
FYK34_02255 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEL54474
UniProt:
A0A5C1DCQ9
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All DBs
Position
467219..468535
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AA seq
438 aa
AA seq
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MNKTPRVGFVSLGCPKAASDSEQILTRLRAEGYEISPSYDGADLVVVNTCGFIDSAVEES
LDAIGEALNENGKVIVTGCLGAKGDVVRDVHPSVLAVTGPHATEEVMTAVHTHLPKPHDP
FVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAKA
GVKEILVISQDTSAYGVDTKYKMGFHNGRPVKTRMTELCEELGRHGIWVRLHYVYPYPHV
DEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPELVIRSTF
IVGFPGETEEDFEELLAFIREAELDRVGCFTYSPVEGATANELPDPVPEDVKEARKERFM
AVQAEISARRLERRVGQTLQVLVDEIDDEGTAVCRSYADAPEIDGLVFVEDAAGMQPGEF
YQVEIVDCSEHDLWGVRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactccccgcgtcggtttcgtctcgctgggctgccccaaggccgccagcgat
tccgagcagatcctgacccgccttcgcgccgaaggctatgaaatctccccgtcctacgat
ggcgcggacctggtggtggtgaacacctgcggcttcatcgattccgccgtcgaggagtcg
ctggacgccatcggcgaagccttgaacgaaaacggcaaagtgatcgtcaccggctgtctg
ggggccaagggcgatgtggtgcgcgatgtgcatccctcggtcttggccgtgaccggtccg
cacgccacggaagaggtgatgacggcggtgcatacccacctgcccaagccgcatgacccc
ttcgtcgacttggtgccggacatcggcgtgcgtctgacgcccaagcactacgcttatctg
aagatttccgagggctgcaatcaccgctgtactttctgcatcatcccgtccatgcgcggc
gatctggaaagccggcccatccacgacgtgctgcgcgaggccgagagcctggccaaggcc
ggcgtcaaagaaatcctggtgatctcgcaggacacttcggcctatggcgtggacaccaag
tacaaaatgggcttccacaacggccgcccggtcaagacccgcatgaccgagctgtgcgaa
gagctgggccgccacggcatctgggtgcgcctgcactacgtttacccgtacccgcacgtg
gatgaagtgattccgctgatgcgcgacggcaagatcctgccctacctggacatcccgttc
cagcacgccagccagaaggtgctgaagctgatgaagcgcccggccaatagcgacaacgtg
ctggcgcgcatcaagaagtggcgcgaaatctgcccggaactggtgatccgctccaccttt
atcgtcggcttccccggcgagaccgaggaagacttcgaagagctgctggccttcatccgc
gaggccgagctggaccgcgtcggctgctttacttactccccggtggaaggcgccacggcc
aacgagctgcccgatccggtgccggaagacgtgaaggaagcgcgcaaggagcgcttcatg
gccgtgcaggccgagatcagcgcgcgccgcctggagcgccgcgtcggccagaccctgcag
gtgctggtggacgagatcgacgacgaaggcacggcggtgtgccgcagctacgccgacgcg
ccggagatcgacggcctggtgttcgtcgaagacgccgccggcatgcagccgggcgagttc
taccaagtggaaatcgtcgactgcagcgagcacgacctgtggggcgtgcgcaagtaa
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