Chromobacterium paludis: FYK34_03185
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Entry
FYK34_03185 CDS
T06224
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03030
DNA replication
chrm03430
Mismatch repair
chrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FYK34_03185
03430 Mismatch repair
FYK34_03185
03440 Homologous recombination
FYK34_03185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrm03032
]
FYK34_03185
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_03185
Enzymes [BR:
chrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FYK34_03185
DNA replication proteins [BR:
chrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FYK34_03185
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FYK34_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_18
AAA_30
ResIII
nSTAND3
Mg_chelatase
TIP49
PIF1
Rad17
AAA_19
AAA_7
TsaE
Herpes_Helicase
NTPase_1
AAA_24
ABC_tran
AAA_28
Zeta_toxin
RsgA_GTPase
DUF815
SKI
VapE-like_dom
Sigma54_activat
ORC-CDC6-like
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
QEL54636
UniProt:
A0A5C1DD30
LinkDB
All DBs
Position
703468..705393
Genome browser
AA seq
641 aa
AA seq
DB search
MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAK
SLNCETGTTAEPCGECQACRQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTMGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP
QQVSSHLAHMLDVEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGMGEVKEDGVRAM
LGAVDRRYLFSLLQALAAADGPLLMAEADKLAERGISFDAALAELAVLLQQLALAQTVPA
ALADDEPEREAIFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFHP
VNAPAESAAPTRPAAPSQPRPAAASAMAAASVSLPAERGLSPAARALQAAGLGNQAKTAP
RAEPDEAAAPAEPEPEPAPRPQAVAQVQPAPAPAAPQPGTAPSSPRAAVPSPVEEADERD
DEEIVDTPWQQDEDGLPDYAMQPPLEDEPVSYCFDGDWPRLVAELGAKLGAARMLAHNAV
LKNWSQSRLELAVPESFRHMSGRDYQEKLKAALADRFGHAVELAVTVEELGIETPAMTGA
RLRQEQLAAARECLQNDPVVQQMVREFGATLLIETIQPVQE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtccttgcccgcaagtggcgtcccaagcgcttcgccgacctggtcggc
caggagcatgtggtccgcgccctgtccaacgccctcaaagagcagcggctccatcacgcc
tacctgctgaccggcacccggggggtgggcaagaccactatcgcccgcattctggccaag
agcctgaactgcgaaaccggcaccacggcggagccttgcggcgaatgccaggcctgccgc
cagatcgacgccggccgctatgtggacctgctggagatcgacgccgcgtccaacaccggc
atcgacaatatccgcgaagtgctggaaaacgcgcagtacgcgccgaccatgggccgcttc
aaggtctacatcatcgacgaagtgcacatgctgtccaagagcgccttcaatgcgatgctg
aagacgctggaggagccgcccggccacgtcaagttcatcctggccaccaccgatccgcag
aaagtgccggtgacggtgctgagccgctgcctgcagttttccctgcgcaatatgacgccg
cagcaggtgtccagccatctggcccacatgctggacgtggaaggcatccattacgaggcg
ccggcgctggcgctgctgggccgcgccgcctcgggttcgatgcgggacgcgcagtccttg
ctggatcaggctatcgcctacggcatgggcgaagtcaaggaagacggcgtgcgcgccatg
ctgggcgcggtggaccgccgctacctgttttctctgctgcaggccctggccgcggccgac
ggccccttgctgatggccgaggccgacaagctggctgaacgcggcatcagcttcgacgcc
gccttggcggaactggccgtgctgctgcagcaactggcgctggcgcagaccgtgcctgcg
gcgctggccgacgacgagccggagcgcgaggccatctttgcgctggccgacgccatcgcg
ccgcaggacgtgcagctttactatcaaatcgccatccacggccgcaaggacttggccctg
gcgccggatgagcacgccggcttcaatatgaccttgctgcgcatgctggccttccatccg
gtcaacgcgccggcggaaagcgccgcgcctacgcgcccggccgcgcccagccagccgcgt
ccggcggcggcttccgccatggccgcggccagcgtgtcgctgccggcggagcggggcctg
tctccggcagcgcgcgccttgcaggccgccggtcttggcaatcaggccaagaccgcgccg
cgcgccgagccggatgaggccgcggccccggcagagcccgagcccgagcccgcccctagg
ccgcaagccgtcgctcaggttcagcccgcgcccgcgccggcggctccccagcccggaacc
gcgccgtcctcgccccgcgcagccgtgccttcgccggtagaggaggccgacgagcgcgac
gacgaggagatcgtcgatacgccctggcagcaggacgaggatggcttgcccgattacgcc
atgcaaccgccgctggaagacgagcctgtcagctactgctttgacggcgactggccgcgg
ctggtggcggagttgggcgccaagctcggcgcggcgcgcatgctggcgcataatgcggta
ttgaagaactggagccagagccggctggagctggcggtgcccgagagcttccgccacatg
agcggacgcgactaccaggaaaaactcaaagccgcgctggccgaccgtttcggccacgcg
gtggaactcgcggtgacggtggaggagctggggatagaaaccccggccatgaccggcgcc
cgcttgcgccaggagcagttggccgccgcccgcgagtgtttgcaaaacgatccggtggtg
cagcagatggtgcgcgagttcggcgccacgctgctcatcgagaccattcaacccgtacag
gagtga
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