Chromobacterium paludis: FYK34_04060
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Entry
FYK34_04060 CDS
T06224
Name
(GenBank) PLP-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00300
Lysine biosynthesis
chrm00470
D-Amino acid metabolism
chrm01100
Metabolic pathways
chrm01110
Biosynthesis of secondary metabolites
chrm01120
Microbial metabolism in diverse environments
chrm01230
Biosynthesis of amino acids
Module
chrm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FYK34_04060
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FYK34_04060
Enzymes [BR:
chrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FYK34_04060
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Peptidase_M78
Motif
Other DBs
NCBI-ProteinID:
QEL54799
UniProt:
A0A5C1DFP2
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All DBs
Position
complement(894328..895518)
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AA seq
396 aa
AA seq
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MTQTDALSIPLPPDEQALQWLWDVKTPGYVFDPSIVLARYRKLRELLDSRLIVSLKANSN
LELLIRCGHGFVDGVELASLGELDLAVGRISSTKYVNNPSMDETFMRAALASRCVFIIDS
LGQAERLIAVLGKQPAPQTILRLNAAELMPGRRKEAADHFGMSPQEAMLAAAALSRADVP
VIGLHSFVGSHQFRVDERGGDSADLAHALAALAGDIERVAGAPIAMLNCGGGFGERFHED
ESVFAAYRERLAPLRQRFQLAHESGRAIFAGAGLFATRVRAVKTLGGQTIAVCDGGLSHN
FLLARTESAIKKYAAPRLLRRQPAPEGAAVQPVRFVGSTCSRADVIGWQPDPQAAPAVGD
LVIFDQCGAYHPSYSVSGFLSLGAAGAYIHQTGETA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaactgacgccctttccatcccgctgccgccagacgagcaggccctgcaatgg
ctgtgggacgtcaagacgcccggctacgtgttcgacccgtctatcgtcctggcgcgctac
cgcaagctgcgcgagctgctggacagccggctgatcgtctcgctgaaggccaattccaat
ctggagctgctgatacgctgcggccatggcttcgtcgacggcgtggagctggccagcctg
ggcgaactggacctggccgtcggccgcatctcgtcgaccaagtacgtcaacaacccctcg
atggacgagaccttcatgcgcgccgccctggcttcgcgctgcgtcttcatcatcgacagc
ctgggccaggccgaacgattgattgccgtgctgggcaagcaacccgcgccgcagaccatc
ttgcggctgaacgcggccgagctgatgccgggccgccgcaaggaggcggccgaccacttc
ggcatgagcccgcaggaagccatgctggcggcggcggcgctgagccgcgccgatgtgccg
gtcatcggcctgcacagcttcgtcggctcgcaccagttccgcgtggacgagcgcggcggc
gactcggccgacctcgcccacgcgctggccgccctggccggcgacatcgagcgcgtcgcc
ggcgcgcccatcgccatgctcaactgcggcggcggcttcggcgaacgcttccacgaggac
gagtccgtcttcgccgcctaccgcgagcggctggctccgctgcgccagcgcttccagctg
gcgcacgaatccggccgcgccatcttcgccggcgccggcctgttcgccacccgcgtgcgc
gcggtgaagaccctgggcggccagaccatagccgtgtgcgacggcggcctcagccacaac
ttcctgctggcgcgcaccgagtccgccatcaagaaatacgccgcgccgcgcctgctgcgc
cgccagccggcgcccgaaggcgcggccgtccagcccgtgcgctttgtgggcagcacctgc
agccgcgccgacgtcataggctggcagcccgatccgcaggccgcgcccgccgtcggcgac
ctggtgattttcgaccaatgcggcgcctatcaccccagctacagcgtcagcggcttcctg
tcgctgggcgcggccggcgcctacatccaccagaccggagaaaccgcatga
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