KEGG   Chromobacterium paludis: FYK34_04490
Entry
FYK34_04490       CDS       T06224                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
chrm  Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:chrm02044]
    FYK34_04490 (tssC)
Secretion system [BR:chrm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FYK34_04490 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF3386
Other DBs
NCBI-ProteinID: QEL54874
UniProt: A0A5C1DDP7
LinkDB
Position
987678..989156
AA seq 492 aa
MSAELQQQAAPAAADASSLLDNIIEQSRIASNESEKSHTRDLIGELVDQVLQGSVTVSRD
LSASIDARIAEIDQLISDQLNNVMHHADFQKLEASWRGLNYLVMQSETGTQLKIKVLNAS
KKDLVKDFKSAAEFDQSALFKKIYEEEYGTFGGAPYGALVGDYEFTRHPEDFYLMEELSH
VAASAHAPLISSAAPGLFGLETFADIGKPRDLSKIFDTVEYAKWKSFRESEDSRYVGLVL
PHVLGRLPYGRDNVPVEAFDFEENVDGSNHDKYLWTNAAYAFAARLTDAFAQYGWLAAIR
GVEGGGLVEGLPAHTFKTDDGEVALKCPTEVAITDRTEKLLSDLGFISLVHCKNTDYAAF
FGGQSAQKAKTYNTDSANANARLSTQLPYIFAVSRIAHYMKSIMRDKIGSFASRQNVQDY
LNTWLSQYVLLDDSASQEAKAKYPLREARVDVVEVPGKPGVYRAAAFLRPHFQLDELTIS
LRLVAELPQPAG
NT seq 1479 nt   +upstreamnt  +downstreamnt
gtgagcgcggaactgcaacaacaggccgctccggccgccgccgatgcctccagcctgctc
gacaacatcatcgagcagagccgcattgcctccaatgagagcgaaaagagccacacccgc
gacttgatcggcgaactggtggaccaggtattgcaaggcagcgtcaccgtctcgcgcgac
ctgtcggccagcatagacgcgcgcatcgccgagatcgaccagctgatctccgaccagctg
aacaatgtgatgcaccatgccgacttccagaaactggaagcgtcctggcgcggcctgaac
tatctggtgatgcagtctgagaccggcacccagctgaagatcaaggtgctgaacgcgtcc
aagaaggacctggtcaaggacttcaagtccgccgccgagttcgaccagagcgcgctgttc
aagaaaatctacgaagaagaatacggcactttcggcggcgcgccttatggcgccctggtg
ggcgactacgaattcacccgccatccggaagacttctacctgatggaagagctgtcgcac
gtggccgcttccgcccatgcgccgctgatctcatcggccgcgccgggcctgtttggcctg
gaaaccttcgccgatatcggcaagccgcgcgacctgagcaagatttttgacaccgtcgag
tatgccaagtggaaatctttccgcgaatcggaagactctcggtatgtcggcctggtgctg
ccgcacgtcctgggccgcctgccgtacggccgcgacaacgtgccggtggaggcgtttgac
ttcgaggaaaacgtcgacggcagcaaccacgacaaatatctgtggaccaacgcggcttac
gccttcgccgcgcgtctgaccgacgccttcgcccagtatggctggctggccgccatccgc
ggcgtggagggcggcggcctggtggaaggcctgccggctcacaccttcaagaccgacgac
ggcgaagtggcgctgaagtgtccgaccgaagtcgccattaccgaccgcacggaaaagctg
ctgtccgatctgggctttatctcgctggtgcactgcaagaacaccgactacgcggccttc
ttcggcggccagtctgcgcaaaaggccaagacctacaacacggactcggccaacgccaac
gcgcgtctgtccacgcagctgccttacatcttcgccgtgtcccgcatcgcgcattacatg
aaatccatcatgcgcgacaagatcggcagcttcgcctcgcgccagaacgtgcaggactac
ctgaacacttggctgtcgcagtacgtgctgctggacgactccgccagccaggaggccaag
gcgaaatacccgttgcgcgaagcgcgcgtggacgtggtggaagtgccgggcaagcccggc
gtctatcgcgccgccgccttcctgcgtccgcacttccagctggatgagctgaccatttct
ctgcgtctggtggccgagttgccgcaaccggccggctaa

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