KEGG   Chromobacterium paludis: FYK34_04535
Entry
FYK34_04535       CDS       T06224                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
chrm  Chromobacterium paludis
Pathway
chrm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FYK34_04535 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:chrm02044]
    FYK34_04535 (tssH)
Secretion system [BR:chrm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FYK34_04535 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 Clp_N nSTAND3 AAA_7 Zeta_toxin AAA_25 TniB IstB_IS21 Sigma54_activat AAA_14 ResIII AAA_24 NTPase_1 AAA_19 AAA_33 SRP54 T2SSE CbiA Hpr_kinase_C DUF4407
Other DBs
NCBI-ProteinID: QEL54883
UniProt: A0A5C1DEG3
LinkDB
Position
998768..1001407
AA seq 879 aa
MSVSLKSLIDRLTPTARQAIEQAASRALARTHFEIEIEHALLAMFDQDNNGALAALRALG
ADLDRVERELDAALDNFRSGNTRNPVLSSWLPKWLEKAWLLASAEHGQDNVSTLDLMLAL
WQDDALRGALQSGAPALARLDAGKLKGAYAALRQHGSEAAGHAAAAEAGEGEQGDAPAAP
QGKRGSPALDKYTIDLTAQARAGKIDPILGRDVEIRQMIDILMRRRQNNPILTGEPGVGK
TAVVEGLARKIVLGEVPPVLAGVTLRTLDLGLLQAGASVKGEFENRLRQVIDEVKASPVP
IILFIDEAHTLIGAGGAAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARR
FQVVKVEEPVPEIAVQMVRGLTHAMADHHKVEILNEAVAAAVHLSSRYIAGRQLPDKAIS
VLDTACARVALSRAGKPGPIEDVSVLMDNIDREIAALKREEGHAERIAELEAQRAELEGN
LQQLHEAWAAQQKLVEEIDQLKAQRDEAKPAKGKKISPLQAKRKELRELQKHQPLAFECV
DESVIADVIAGWTGIPLGRMVSNELEQVQKLAQLLAERVIGQDHALEQIAERVQIAKAGL
EDPGKPKGVFMLVGPSGVGKTETALALAEALYGGERNLITINMSEYQEAHSVSGLKGSPP
GYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLEDSEGREVDFKN
TIILLTSNAGTDLVMRACEHGVTVEDVTRDPTAEDLVEILRPTLQKTFKPAFLGRLTIVP
YFPISDDVLRAIVELKLEKIRRRIADNHGAQVEFPADLAEQMAARCLDVDSGARNADAIL
TRTLLAQISNDLLSRMATGKPVKKIAVSLKGEQVKVKVS
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgtctgtatcgttgaaatcgctgattgaccgcctgacgcccaccgcgcgccaggccatc
gaacaagccgccagccgcgccttggcccgcacccatttcgagatcgagatcgaacacgcc
ttgctggcgatgttcgatcaggacaataacggcgcgttggcggccctgcgcgcgctgggc
gcggacctggaccgcgtggagcgcgagctggacgccgcgttggataatttccgcagcggc
aacacccgcaacccggtgttgtcgtcctggctgcccaagtggctggaaaaggcctggctg
ctggccagcgccgaacacggccaggacaatgtgtccacgctggacctgatgctggcgctg
tggcaggacgacgccttgcgcggcgcgctgcagtccggcgcgccggcgctggccaggctg
gacgccggcaagctgaagggcgcttacgccgcgctgcgccagcatggcagcgaggccgcg
ggccatgccgccgctgccgaagccggcgagggcgagcaaggcgacgcgccggccgcgccg
caaggcaagcgcggcagcccggccctggacaagtacaccatagacctgaccgcgcaggcc
cgcgccggcaagatcgaccccatcctgggccgcgatgtcgaaatccgccagatgatagac
attctgatgcgccgccggcagaacaaccccatcctcaccggcgagccgggcgtgggcaag
accgcggtggtggaaggcctggcgcgcaagatcgtgctgggcgaagtgccgccggtgctg
gccggcgtgaccctgcgcacgctggacctgggcttgctgcaggccggcgccagcgtcaag
ggcgagttcgagaaccgcctgcgccaggtgatagacgaggtcaaggccagcccggtgccc
atcatcctgttcatcgatgaggcgcacaccttgatcggcgccggcggcgcggccggccag
aacgacgcggccaacctgctgaagccggccctggcgcgcggcgagctgcgcaccatcgcg
gcgacgacttgggccgagtacaagaaatacttcgagaaagacgccgcgttggcgcgccgc
ttccaggtggtgaaggtggaggagccggtgccggaaatcgccgtgcagatggtgcgcggc
ctgacccacgccatggccgaccaccacaaggtggaaatcctcaacgaggcggtggccgcc
gccgtgcatctgtccagccgctacatcgccggccgccagctgccggacaaggccatcagc
gtgctcgacaccgcctgcgcccgcgtggcgctgtcgcgcgccggcaagccggggccgatc
gaagacgtgtcggtgctgatggacaacatcgaccgagagatcgccgcgctgaagcgcgag
gaaggccatgccgagcgcatcgccgaactggaagcgcagcgcgcggagctggaaggcaat
ctgcaacagctgcatgaggcatgggcggcgcagcagaagctggtcgaagaaatcgaccag
ctcaaagcgcagcgcgacgaggccaaaccggccaagggcaagaagatcagcccgttgcag
gccaagcgcaaggaattgcgcgagctgcaaaagcaccagccgctggccttcgaatgcgtg
gacgaaagcgtgatcgcggacgtgatcgccggctggaccggcattccgctgggccgcatg
gtcagcaacgagctggaacaggtgcagaagctggcccagctgctggccgaacgcgtcatc
ggccaggaccacgcgctggagcagatcgccgagcgcgtgcagatcgccaaggccggcctg
gaagacccgggcaaacccaagggcgtgttcatgctggtggggccgtccggcgtaggcaag
accgagaccgcgctggcattggccgaggcgctgtacggcggcgagcgcaacctgatcacc
atcaatatgtccgaataccaggaagcgcacagcgtgtccggcctgaagggctcgcccccg
ggctatgtcggctacggcgagggcggcgtgctgaccgaggccgtgcgccgcaagccttac
tccgtcgtgctgctggacgaggtggaaaaggcgcacccggacgtgctggagctgttcttc
caggtgttcgacaagggcgtgctggaggatagcgaaggccgcgaggtggacttcaagaac
accatcatcctgctgacgtccaacgccggcaccgacctggtgatgcgcgcctgcgagcac
ggcgtgacggtggaggacgtgacgcgcgacccgactgcggaagacctggtggaaatcctg
cgcccgacgctgcagaagaccttcaagccggccttcctgggccgcctgaccatcgtgccg
tacttcccgatcagcgacgatgtgctgcgcgccatcgtcgagctgaagctggaaaagatc
cgccgccgcatcgccgacaaccacggcgcgcaggtggaattcccggccgatctggccgag
cagatggccgcgcgctgcctggacgtggacagcggcgcgcgcaatgccgacgccatcctc
acccgcacgctgctggcgcagatctccaacgatctgttgtcgcgcatggccacgggcaag
ccggtgaaaaagatcgccgtctcgctcaagggcgagcaggtgaaggtgaaagtcagctaa

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