Chromobacterium paludis: FYK34_06310
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Entry
FYK34_06310 CDS
T06224
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00230
Purine metabolism
chrm00240
Pyrimidine metabolism
chrm01100
Metabolic pathways
chrm01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
FYK34_06310 (nrdD)
00240 Pyrimidine metabolism
FYK34_06310 (nrdD)
Enzymes [BR:
chrm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
FYK34_06310 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
zf-C2HC_3
RecO_C
DUF7130
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
QEL55205
UniProt:
A0A5C1DEK8
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All DBs
Position
1392349..1394487
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AA seq
712 aa
AA seq
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MLQVRKRDGAMVEFDIGKIANACRKAAAAAEHAEPAALALEIAAQVERECRELARDGRLD
IPAIQKRVEDALMRRYPEVARVYIEYRHDRDTVRAQGSELHAKLMGLVHKTDQEATTENA
NKDANVFPVMRDLMAGIVSKQFAGNFLPKDILTAHHDGDLHFHDLDYSPFLPFTNCCLVD
LKGMLEQGFRLGNAQIESPKSIGVACAVTAQIIAQVASHQYGGTTIPNIDQTLAPYVLKS
YRKNLEVARQYGIADPERYARERTEKECYDGIQACEYEINTLFSSNGQQPFVTFSFGMGT
TWEARIIQQSILRVRIKGLGKEGITPVFPKLVMFIDEGINLKPGDPNYDIKQLALECTSK
RMYPDIISAQLIRQTTGSSVPVSPMGCRSFLAVWRDAAGREVLDGRNNLGVVSLNLPRIA
IEAQGDADVFWRLMERRLQLCFRALMLRIERLRGVKANVAPILYTEGAFGMRLRPDEDIM
RLFDHGRASISLGYIGLHEVAVLLFGAHPADSAEAQAFQRQVVARMAAAAAAWRRETGFG
FSLYSTPSESLCHRFCKLDRERFGEIAEVTDKGYYTNSFHLDVFRKVNPFQKIDLEAGFA
ELASGGHITYVELPNMQHNLKALEAIWDYALQRVPYFGSNTPVDSCGECGFMGEAAADAS
GFCCPQCGNRDSASLSVTRRVCGYLGSPNARPFNAGKQKEVMRRVKHYGGEH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggtgcgcaaacgcgatggcgcgatggtggaattcgacatcggcaagattgcc
aatgcctgccgcaaggctgccgcggcggcagagcacgccgaaccggctgcgctggccttg
gagatcgccgcgcaagtggagcgcgaatgccgcgagctggcgcgcgacggccgcctggac
attccagccatccagaagcgggtggaggacgcgctgatgcggcgctatccggaagtggcg
cgcgtctacatcgaataccgccatgaccgcgacaccgtgcgcgcgcagggctcggagctg
cacgccaagctgatgggcctggtgcacaagaccgaccaagaggcgaccacggaaaacgcc
aacaaggacgccaatgtctttcccgtgatgcgcgacctgatggccggcatcgtctccaag
caattcgccggcaatttcctgcccaaggatatcctgaccgcgcaccatgacggcgacctc
catttccacgatctggactactcgcccttcctgcctttcaccaattgctgcctggtggac
ttgaaaggcatgctggagcagggcttccgcctgggcaacgcgcagatagaaagccccaag
tccataggcgtggcttgcgcggtcaccgcgcagatcatcgcccaagtggccagccaccag
tatggcggcaccaccattcccaatatcgaccagaccctggcgccctacgtgctgaagagc
tatcgcaagaaccttgaggtggccaggcagtacggcatcgccgatccggagcgctatgcg
cgcgagcggacggagaaggagtgctatgacggcatccaggcctgcgaatacgagatcaat
accctgttcagctccaatggccagcagccttttgtcaccttttccttcggcatgggcacg
acctgggaggcgcgcatcatccagcagtccatcttgcgcgtgcgcatcaagggcttgggc
aaggagggcatcacgccggtctttcccaaactggtgatgttcatagatgagggcatcaat
ctgaagccgggcgatcccaattacgacatcaagcagctggcgctggaatgcacatccaag
cgcatgtatccggatatcatttccgcgcagttgatccgccagaccactggctcgtcggtg
ccggtctcacccatgggctgccgcagcttcctggcggtttggcgcgatgccgccggccgc
gaggtgctggatggccgcaacaacctgggcgtggtcagcctgaacctgccgcgcatcgcc
atcgaggcgcaaggcgatgcggacgtcttctggcgcctgatggagcggcggctgcagctg
tgcttccgcgccttgatgctgcgcatcgagcggctgcgaggggtcaaggccaatgtggcg
ccgattctttacaccgaaggcgccttcggcatgcgcctgcggcccgacgaggacatcatg
cggctgttcgatcacggccgcgcgtccatttccctgggctatatcggcctgcacgaggtg
gcggtattgctgtttggcgcgcatcccgccgatagcgccgaggcgcaggcatttcaacgc
caggtggtggcgcgcatggcggcggcggcggcggcgtggcggcgcgagaccggcttcggt
ttctcgctgtattccacgcccagcgaatccttgtgccaccgcttctgcaagctggaccgg
gagcgattcggcgagatcgcggaggtgacggacaagggctattacaccaactccttccat
ctggacgtgttccgcaaggtcaatccgttccagaagatagacttggaggctggcttcgcc
gagctggccagcggcggccatatcacctatgtcgagctgcccaatatgcagcacaacctg
aaggcgctggaggcgatctgggattatgcgctgcagcgcgtgccgtatttcggcagcaat
acgccggtggactcatgcggcgagtgcggcttcatgggcgaggcggcggccgatgcgtcg
ggtttttgctgcccgcagtgcggcaaccgcgacagcgcctcgttgtccgtcacgcgccgg
gtgtgcggctatctgggcagtcccaacgccaggcctttcaatgccggcaagcaaaaggaa
gtgatgcgccgggtcaagcactatggcggcgagcactga
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