Chromobacterium paludis: FYK34_06410
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Entry
FYK34_06410 CDS
T06224
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FYK34_06410 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrm03032
]
FYK34_06410 (rnhB)
Enzymes [BR:
chrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
FYK34_06410 (rnhB)
DNA replication proteins [BR:
chrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
FYK34_06410 (rnhB)
Elongation factors (archaeal)
FYK34_06410 (rnhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
QEL57821
UniProt:
A0A5C1DMB7
LinkDB
All DBs
Position
1412174..1412755
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AA seq
193 aa
AA seq
DB search
MTCGVDEAGRGPLAGAVFAAAVILDPAKPIVGLADSKVLSEAKREALAEQIKRDALAWSI
ASASVDEIDKLNILQATLLAMTRAVEGLPVRPDLAQIDGNRVPKHLPVPGEAIVKGDAKV
QAISAASILAKTARDAELVALDALHPQYGFARHKGYPTAEHLAAIEAHGALPAHRKTFGP
VKAWLARQQGQLF
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ctgacctgcggcgtggacgaggcgggccgcggcccgctggccggcgccgtgttcgccgcc
gccgtcatcctggacccggccaagccgattgtcggcctggccgactccaaggtgctgagt
gaggccaagcgcgaggccttggcggagcaaatcaagcgcgacgcgctggcctggagcatc
gccagcgccagcgtcgacgagatagacaagctcaatatcctgcaggccaccctgctggcg
atgacgcgcgccgtggaaggcctgccggtgcggccggacctggcgcagatagacggcaac
cgcgtgcccaagcacttgccggtgccgggcgaagccatcgtcaagggcgacgccaaggtg
caggcgatttccgccgcgtccatcctggccaagaccgcgcgcgacgccgagctggtggcg
ctggacgcgctgcacccgcagtacggcttcgcccgccacaagggctatcccaccgcggaa
cacctggccgccatcgaagcgcacggcgcgctgccggcgcaccgcaagaccttcggcccg
gtcaaggcctggctcgctcgccagcaaggccagctgttctga
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