Chromobacterium paludis: FYK34_06530
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Entry
FYK34_06530 CDS
T06224
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrm03032
]
FYK34_06530
03036 Chromosome and associated proteins [BR:
chrm03036
]
FYK34_06530
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_06530
DNA replication proteins [BR:
chrm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FYK34_06530
Chromosome and associated proteins [BR:
chrm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FYK34_06530
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FYK34_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Lmo2446-like_N
HU-DNA_bdg
HU-CCDC81_euk_2
UBA_HYPK
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
QEL55246
UniProt:
A0A5C1DF33
LinkDB
All DBs
Position
1446957..1447226
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIDAIAAEADISKAAAAKALDGMVAAVTDALKKGDTVTLVGFGTFYVGERAERSG
RNPKTGETIKIPAARSPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaactgattgacgccattgccgcagaggccgacatttccaaggccgct
gctgccaaagcgctggacggcatggtggctgccgtaaccgacgccctgaaaaaaggcgat
accgtgacgctggtgggcttcggcaccttctatgtgggcgagcgcgccgagcgcagcggc
cgcaatccgaaaaccggcgaaaccatcaagatcccggcggcccgttctccgaagttccgc
gctggcaaggcactgaaggacgcgctataa
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