Chromobacterium paludis: FYK34_08235
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Entry
FYK34_08235 CDS
T06224
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrm03016
]
FYK34_08235 (truA)
Enzymes [BR:
chrm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FYK34_08235 (truA)
Transfer RNA biogenesis [BR:
chrm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FYK34_08235 (truA)
Prokaryotic type
FYK34_08235 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
QEL55559
UniProt:
A0A5C1DHW8
LinkDB
All DBs
Position
complement(1806617..1807405)
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AA seq
262 aa
AA seq
DB search
MRIALGIEYDGRAFAGWQSQPHGNTVQDILNRALGQIAGNREVATVAAGRTDAGVHAAMQ
VAHFDTEASRPLNAWVRGVNALLPPEIAVVWAREAGDDFHARFSAFSRSYSYFLLTHPVR
SCLLAGKVGWYHQALDVAAMRKAAACLLGRHDFSSFRASECQAKSPVKDLQRLDIVEDGG
LIRFDLMADAFLHHMVRNLVGALLYVGKGAMDAAGMQALLAARDRTCAPPTFMPDGLYLT
GVGYPEAFGLPSCCEAGRLKLR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgctcggcatcgagtatgacggtcgggcatttgccggctggcagagtcag
ccgcacggcaacacggtacaggatatattgaatcgggccctgggccagatcgccggcaac
cgggaggttgccacggtagctgccggccgcaccgatgccggcgtgcacgccgcgatgcaa
gtggcgcatttcgacaccgaagccagccggccgctgaatgcctgggtgcgcggcgtcaac
gccttgctgccgcccgagatcgccgtggtgtgggcacgcgaagcgggcgatgatttccac
gcgcggttttccgccttttcccgcagctacagttatttcctgctgacccatccggtgcgt
tcctgcctgctggcgggcaaggtgggctggtatcatcaggccttggacgtggcggcgatg
cgcaaggcggcggcatgtctgctgggccgccacgatttttccagcttccgcgcgtccgag
tgtcaggccaaatcgccggtcaaggatttgcagcggctggatatcgtggaagatggcggt
ctgatccgcttcgatctgatggccgatgcctttttgcatcatatggtgcgtaatctggtg
ggcgccttgctctacgtcggcaagggcgcgatggacgctgccggcatgcaggccttgctg
gccgcgcgcgaccgcacctgcgcgccgcccaccttcatgccggatgggctgtatttgacc
ggcgtgggttatccggaagcgttcggcctgccatcttgctgcgaggcggggcggctcaaa
ctgcgctga
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integrated database retrieval system
