Chromobacterium paludis: FYK34_08990
Help
Entry
FYK34_08990 CDS
T06224
Name
(GenBank) PAS domain S-box protein
Organism
chrm
Chromobacterium paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
EAL
PAS_9
PAS_4
PAS
GGDEF
PAS_8
DUF4118
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QEL55693
UniProt:
A0A5C1DGK8
LinkDB
All DBs
Position
complement(1965772..1969944)
Genome browser
AA seq
1390 aa
AA seq
DB search
MRIKPRTRYILLATAGYGIFAWAWLAFAGDGIRMLGGSNPSMLNEGLFALCSVLLLSLGW
RAAPTEDGASAAQRPAALAADLLPRQGAVGLAYALACVLTAAIVALRVALVSDAGAQPSL
ILFTLPIVLCASLGGFGPGLLATLLALLAADFSPAWPWHATLRWSSPLQQALLLGEGLAI
SGFGAMLRRSLSRAELNHRLLDSVVSSTSDAVFIKDVQGRYLLINQAGLAFVGKARADLL
GRDDLAAFDEATARKLIASDRAAMQSGRVQTYEECLTLQSGERMVFQVTKGPVYTPDHRL
IGLFGISRDITEQKRAAEALQASEAELQLAQQLASLGSWSWDLASNRVHWSNETYRLFGL
ASQDAPPAYAAWQRYFTLDGWMQLSDAMERCRLIGLGYECDLELLRQDGTSCWVTVHVEA
RRDEEGKVAGLYGTIQDITERTQMALLIQESEQRLQLVVEATSDGFWDWDLRSGRIYRSP
RFYEVTGAHPEENDGDFRFFRQLVHAADLPFVLQALEAHRRGKTPRIEVEFRLADQTSGV
RWLQVRGRAVEWDERGAALRLVGNLSDITERKRVDDDLRLVLNEAGDAIWVIDAEGGFVF
ANPAACQLTGHSMEELKTMRLRDLLAGECLSALPGHLAALDAGAFQRSEWLLRRKKGGNV
SVDLSTGKLKDGRYMAFGRDLTEQRRAEQALRQREQQLARVIEGSDQGYWDWNLKTGSFQ
VSPRWEGMLGYEPGQMRITGENWYSHVHPEDAERARESIRRNLSGEAASHEVEIRCRTRG
GDWRWILSRGRVVERDETGAPMMMAGTHTDITERKVFEQAQKEAAAVFASSYEGILMVSP
DGFITKVNQAFTRITGYSAEDVVGRKPSILSSGQQPESFYEELWRSLHGHDFWRGELWNR
RKNGELYAELLSISVVRDEHGEVQHYIGIFSDITQLKQHEAELDRVAHFDPLTGVPNRRL
LSDRLRQAIVRASRSGKSCAVCFLDLDGFKTVNDQYGHEMGDQLLIGVSSHLKSVLRGGD
TLARLGGDEFVVLLSDIEAADECVLVLDRILEAVAQPVAIGSAAISVTASVGVSLYPQDN
ADPDTLLRHADQAMYVAKESGKNRYQLFDPESDRKAQEHRQFLELLRQALERNEFALFYQ
PMVDLVDGEIMGMEALIRWRHPQRGLLAPAEFLPHLRGHELESAFGDWVLDAALKQASKW
AEAGHPLRISTNVSPSYLHGGDFCAKLAAALSHYPNVAPDHVELEVQESAQADVEKTIAT
LQQCRGLGVRFALDDFGTGYASLNYLRRLPVDTLKIDNSFVHGMLVSIDDRRTVEGVIQL
AGIFERRAVAEGVETLPHAALLRRLGCRYAQGYGIARPMEAEAVSGWCRRWSQGAIWRQL
DAAAEPDGQM
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaagccgcggacgcgatatatcttgttggcgacggcgggctacgggattttt
gcctgggcctggctggcctttgccggggacggcatccgcatgctgggcggctcgaatccg
tccatgctcaatgaagggctgtttgcgctctgcagcgtgttgctgttgtcgctgggctgg
cgcgccgcgccgacagaggacggcgcctcggctgcgcagcgtcccgcggcgctggcggcg
gacctgctgcccaggcagggggcagtcggactggcgtacgcgctggcctgcgtgctgacc
gcggccatcgtggccttgcgcgtggcgctggtgagcgatgccggcgcgcagccctcgctg
atcctgttcacgctgcccatcgtgctgtgcgccagtctgggcggtttcggccccggcctg
ctggcaaccctgctggcgctgctggccgcggatttctcgccggcctggccctggcatgcc
accctgcgctggagcagcccgctgcagcaggccttattgttgggcgagggactggcgatt
tccggttttggcgccatgctgcggcgcagtctgtcgcgggcggagctgaaccacaggctg
ctggactccgtggtgtccagcacttcggacgccgtgttcatcaaggacgtgcaaggccgt
tacctgctgatcaaccaggcgggcctggcctttgtcggcaaggcgcgggcggatttgctg
gggcgggatgacctggcggcctttgatgaagcgacggcgcgcaagctgattgcctcggat
cgcgcggccatgcaatcggggcgggtgcagacttacgaggaatgcctgaccttgcaaagc
ggcgagcgcatggtgttccaggtgaccaaggggcctgtttacacgccggatcatcgcctg
ataggcctgttcggcatttcccgcgacatcaccgagcaaaagcgcgccgcggaggccctg
caagccagcgaggcggaattgcagctggcgcagcagctggccagcctgggcagctggagc
tgggatttggccagcaatcgcgtgcattggtccaatgagacttatcgtctgttcgggctg
gccagccaggacgccccccccgcctatgccgcttggcagcgttacttcacgctcgatggc
tggatgcagctgtccgacgcgatggagcgctgccgcctgatcggcctgggttacgagtgc
gacctggaattgctgcgccaggacggcacctcatgctgggtgacggtgcatgtcgaagcc
cggcgcgacgaagaaggcaaggtggccggcttgtacggcaccatacaggacatcaccgag
cgcacgcagatggccttgctgatccaagagagcgagcagaggctgcaattggtggtggag
gcgaccagcgacggcttctgggactgggatttgcgcagcggcaggatttaccgttcgccg
cgcttctacgaggtgaccggcgcgcatccggaggagaatgacggcgatttccggttcttc
cgccagctggtgcatgctgccgatctgcccttcgtgctgcaggcgttggaggcgcatcga
aggggcaagacgccgcgcatcgaggtggagttccggctggccgatcagacgagcggcgtg
cgctggctgcaggtgcgcgggcgggcggtggaatgggacgagcgcggcgccgccttacgg
ctggtgggcaatttgtccgacatcaccgagcgcaagcgcgtggacgacgacttgcggctg
gtgttgaacgaggcgggagacgcgatctgggtgatagacgcggagggcggcttcgtgttt
gccaatcccgccgcctgccaattgaccggccacagcatggaagagctgaaaaccatgcgc
ttgcgcgacttgctggcgggggagtgcctgtctgccctgccgggtcatctcgccgccctc
gatgccggcgccttccagcgctcggaatggctgctgcgccgcaagaagggcggcaacgtc
agcgtggatctcagcaccggcaagctcaaggacggccgctacatggcctttggccgcgac
ctgaccgagcagcgccgggcggagcaagcgctgcgccagcgcgagcagcagctggcgcgc
gtgatcgagggctcggaccagggctactgggactggaatctgaagaccggcagcttccag
gtcagcccgcgctgggagggcatgctgggttatgagccgggccagatgcgcatcacgggc
gaaaattggtacagccatgtccatcccgaggacgccgagcgcgcgcgcgaatccatccgc
cgcaatctgagcggggaagcggccagccatgaagtggaaatccgttgccgcacgcgcggc
ggtgactggcgctggatattgtcccgcggccgggtggtggagcgcgacgaaaccggcgcg
ccgatgatgatggccggcacgcataccgacattaccgaacgcaaggtgttcgagcaggcg
caaaaggaagcggccgcggtgttcgccagcagctacgaaggcatcctgatggtaagcccc
gatggcttcatcaccaaggtcaatcaggccttcacccgcatcaccggctacagcgcggag
gatgtcgtgggacgaaagcccagcatcctgtcgtcgggccagcagccggagagcttttac
gaggagctgtggcgctccttgcacggccacgatttctggcgcggcgagctgtggaaccgc
cgcaagaacggcgaattgtatgccgagctgctctccatctccgtggtgcgggacgagcat
ggcgaagttcagcattacatcggcatcttttccgacatcacccagttgaagcagcacgag
gcggaactggaccgcgtggcgcacttcgatcccctcaccggcgtgcccaaccggcgtctg
ctgtccgaccgcctgcgccaagccatcgtgcgggcgtcgcgcagcggcaagtcctgcgcg
gtgtgcttcctcgacctggatggtttcaagacggtcaacgaccaatatgggcacgaaatg
ggcgaccagctgctgataggcgtgagcagccatctgaagtccgtgctgcgcgggggcgat
accctggccaggctgggcggagacgagtttgtggtgctgttgtccgacatcgaggccgcc
gatgagtgcgtgctggtgctggaccgcatcctcgaagcggtggcgcagccggtggccata
ggcagcgcggccatcagcgtgacggccagcgtaggcgtcagcctgtatccgcaggacaac
gccgaccccgacaccttgctgcgccatgccgaccaagccatgtatgtggccaaggagagc
ggcaagaaccgttaccagctgtttgacccggaaagcgaccgcaaggcgcaagaacaccgg
cagtttctggagctgctgcgccaggcgctggagcgcaacgagttcgcgctgttctatcag
cccatggtggatctggtggatggggaaatcatgggcatggaggccctgattcgctggcgg
catccgcagcgtggcttgttggcgcctgcggagttcctgccgcacttgcgcggccacgag
ctggagagcgcctttggcgactgggtgctggacgcggcgctgaaacaggcgtcgaaatgg
gcggaggccgggcatcccttgcgcatcagcaccaatgtcagtccaagctatctgcacggc
ggcgacttctgcgccaagctggcggcggccctgtcgcattatcccaatgtggcgcctgat
catgtggaactggaagtgcaggaaagcgcgcaggccgatgtggaaaaaaccatcgccacc
ctgcagcagtgccgtgggctgggcgtgcgcttcgcccttgacgactttggcaccggctac
gcctctttgaattatctgcggcgtttgccggtggatacgctgaaaatcgacaatagcttt
gtccacggcatgctggtcagcatagatgaccgccgcacggtggagggcgtgatccagctg
gccggcatcttcgagcggcgtgccgtcgcggagggggtggagaccctgccgcacgccgcc
ttgctgcgccgcttgggctgtcgctacgcccaaggctatggcatcgcccgccccatggag
gcggaggccgtgtccggctggtgccggcgctggtcgcaaggcgccatctggcggcagctg
gatgcagcggcggagccggatggtcaaatgtaa
DBGET
integrated database retrieval system
