Chromobacterium paludis: FYK34_10065
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Entry
FYK34_10065 CDS
T06224
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
chrm
Chromobacterium paludis
Pathway
chrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FYK34_10065 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_10065 (uvrB)
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FYK34_10065 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FYK34_10065 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QEL55883
UniProt:
A0A5C1DH24
LinkDB
All DBs
Position
complement(2180259..2182271)
Genome browser
AA seq
670 aa
AA seq
DB search
MLLTFPDSPFQLNQPFPPAGDQPAAIAQLVEGLSDGLSYQTLLGVTGSGKTYTMANVIAQ
TGRPAIIMAHNKTLAAQLYSEMREFFPHNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKSILERPDCIIVATVSAIYGIGDPSDYHQMILHLKEGETTPQRDIISR
LTTMQYSRNDMDFGRGTFRVRGDVIDIYPAESSDTALRVSLFDDEVETLTLFDPLTGTTK
QRVGRFTVFPSSHYVTPRDTVLRACEQIKDELRSRVEWYQKEGKLVEAQRIEQRTRFDLE
MLYEMGFCKGIENYSRHFSGRGPGDPPPTLIDYLPKNALMFIDESHVTVPQVGAMYKGDA
ARKANLVEYGFRLPSAADNRPLKFHEFEKLMPQTVFVSATPAVYEKEHAGQVVEQVVRPT
GLVDPQIEIRPVATQVDDLLSEIRDRMERGERVLVTTLTKRMAEQLADYYTEHGIKVRYL
HSDIDTVERVEIIRDLRLGMFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLNGRALLYADRITDSMKKAMDETERRRAKQMAFNAEHGIVPKGVEKKIKDI
IDGVYSVEAERKKLVDEAAVAMMDEKTLAKEIKRLEKEMMEAARNLEFEKAARIRDELKQ
LKEKAWLSEL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgacttttcccgatagcccgttccaactgaaccagccgttcccgccggccggc
gaccagcccgccgccatcgcgcaactggtggagggcttgtccgatggcctgtcctaccag
acgctgctgggcgtgaccggttccggcaagacctacaccatggccaacgtcatcgcccag
accgggcggccggccatcatcatggcgcacaacaagacgctggcggcccagctctacagc
gagatgcgcgaattcttcccgcacaacgcggtggagtatttcgtctcttactacgactat
taccagccggaagcctacgttcccagccgcgacttgttcatcgagaaagactccagcatc
aacgagcacatcgagcagatgcgcctgtcggccaccaagtcgatattggaacgtcccgac
tgcatcatcgtggcgacggtgtcggcgatctatggcatcggcgacccgtccgactaccac
cagatgattctgcatctgaaggaaggcgaaaccacgccgcagcgcgatatcatcagccgc
ctcaccaccatgcagtacagccgcaacgacatggacttcggccgcggcactttccgcgtg
cgcggcgacgtgatcgacatctacccggcggaaagcagcgacaccgcgctgcgcgtcagc
ctgttcgacgacgaagtggaaacgctgaccctgttcgatcccttgaccggcacgaccaag
cagcgcgtcggccgcttcaccgtattcccgtccagccactacgtgacgccgcgcgacacc
gtgctgcgcgcttgcgagcagatcaaggacgagctgcgcagccgcgtagagtggtatcag
aaagagggcaagctggtggaggcgcagcgcatcgagcagcgcacccgcttcgacctggaa
atgctgtacgagatgggcttctgcaagggcatcgaaaactattcgcgccacttttccggc
cgcggccccggcgatccgccgccgacgctgatcgactatctgcccaagaacgcgctgatg
ttcatcgacgagagccacgtcaccgtgccgcaggtgggcgcgatgtacaagggcgacgcg
gcgcgcaaggccaatctggtggagtacggtttccgcctgccgtccgccgccgacaaccgg
ccgctgaaattccatgaatttgaaaagctgatgccgcagactgtgttcgtctccgccacg
ccggcggtgtacgagaaggagcatgccggccaggtggtggagcaggtggtgcggccgacc
ggcctggtggacccgcagatcgagatccgtccggtggcgacgcaggtggacgacttgctg
tccgaaatccgcgaccgcatggaacgcggcgagcgggtgctggtcaccacgctgaccaag
cgcatggccgagcaattggccgattactacaccgagcacggcatcaaggtgcgctatctg
cacagcgacatcgataccgtggagcgggtggaaatcatccgcgacctgcgcctcggcatg
ttcgacgtgctgatcggcatcaacctgctgcgcgaaggcctggacattcccgaggtgagc
ctggtggcgatcctggatgctgataaagagggtttcctgcgcagcgagcgcagcctgatc
cagaccataggccgcgcggcgcggaacctgaacggccgtgcgctgctctacgctgaccgc
atcaccgactccatgaagaaggcgatggacgagaccgagcgccgccgcgccaaacagatg
gcgttcaacgcggagcacggcattgtgcccaagggcgtggagaagaagatcaaggacatc
atcgacggcgtctacagcgtggaggccgaacgcaagaagctggtggacgaggccgcggtg
gcgatgatggacgagaagacgctggccaaggagatcaagcgcctggagaaggagatgatg
gaggcggcgcgcaatctggaattcgaaaaggccgcgcgcatccgcgacgagctgaagcaa
ctgaaggaaaaggcctggctcagcgagctataa
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integrated database retrieval system
