Chromobacterium paludis: FYK34_11830
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Entry
FYK34_11830 CDS
T06224
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_11830
Enzymes [BR:
chrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FYK34_11830
DNA repair and recombination proteins [BR:
chrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FYK34_11830
Prokaryotic type
FYK34_11830
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEL56203
UniProt:
A0A5C1DHZ5
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All DBs
Position
complement(2538627..2540042)
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AA seq
471 aa
AA seq
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MSKTIGTALVWLRRDLRLDDHAAFYHALKHSRAALPVFVFDASILDALPRDDRRVDFIHQ
SLAALKAELNQLGGDLLIRHGQPRDEIPRLAAELGAEAVFCNRDYEPAARARDAEVAEKL
AERGIAFHSCKDQVVFETDEVLTGAGKPFAVFTPYKNAWLKKLTPFHLQAYPVRRYLDAL
LPRAPEAMPSLADIGFGPSDLAALPVRAGADGAEALFADFSRRIAHYKTMRDYPGIKGVS
YLSVHLRFGTISIRRLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDVVEHAFKPEY
DALPFPNDAEGFEAWKNGQTGYPLVDAAMRQLNHSGYMHNRLRMVAASFLVKDLLIDWRW
GERYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDPDGRFIRRYVPE
LAALPDKLIHAPWLAKPEQLMDAGVRLGRDYPHPIVDHAVQRELALALFKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacgataggcacggcgctggtctggttgcgccgcgatttgcggctggacgac
catgccgctttttaccacgcgctgaagcacagccgggcggcgctgccggtgttcgtgttc
gacgcctcgattttggacgcgttgccgcgcgacgaccgccgcgtcgacttcattcatcaa
agcttggcggcgctgaaggcggagttgaatcagctgggcggcgacctgctgatccgccat
ggccagccgcgggatgagataccgcggttggcggcggagctgggcgcggaggcggtgttc
tgcaaccgcgattacgagccggccgcgcgcgcgcgcgacgcggaggtggcggagaagctg
gccgagcgcggcatcgccttccattcctgcaaggatcaggtggtctttgaaaccgacgag
gtgttgaccggcgccggcaagccgtttgccgtgttcacgccgtacaagaacgcctggctg
aaaaaactgacgcccttccatctgcaggcctatccggtgcggcgctatctggacgcgctg
ctgccgcgcgcgcccgaggccatgccgtcgctggccgacatcggctttggccccagcgac
ctggccgcgctgccggtgcgggcgggcgccgacggggcggaggccctgttcgccgatttt
tcccgccgcatcgcccattacaagaccatgcgcgactaccccggcatcaagggcgtgtcc
tatctcagcgtccatctgcgcttcggcaccatttccatccgccggctggcggcctatgcc
tggcatgacggcggcgagggggcgatgacttggctgagcgagctgatctggcgcgatttc
taccagcaagtgctgtggcaccggccggacgtggtggaacacgcgttcaagccggagtac
gacgcgctgcctttccccaatgacgcggaagggttcgaggcctggaaaaacggacaaacc
ggctacccgctggtggacgcggcgatgcggcagctgaaccatagcggctatatgcataac
cggctgcgcatggtggcggccagcttcctggtgaaagatctcttgattgactggcgctgg
ggcgagcgctacttcgccgaaaagctattggacttcgacctggcggccaataacggcggc
tggcaatgggcggccagcaccggctgcgacgcccagccttatttccgcatcttcaacccg
gtgagccagagcgagaaattcgaccctgacggccgcttcatccgccgttacgtgccggag
ctggcggcgctgccggacaagctgatccacgcgccgtggctggccaaaccggaacagttg
atggacgccggcgtgcggctggggcgggactacccgcatcccatcgtcgatcacgccgtt
cagcgcgaattggcgctggccttgttcaagcgctga
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