Chromobacterium paludis: FYK34_12880
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Entry
FYK34_12880 CDS
T06224
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chrm03021
]
FYK34_12880 (rpoS)
Transcription machinery [BR:
chrm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FYK34_12880 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QEL56388
UniProt:
A0A5C1DKV9
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All DBs
Position
2747677..2748627
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AA seq
316 aa
AA seq
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MSNEIDILDENEILDEDNGEEGAAEAEAEENVDSTAAFEDVVADVTQIYLNDIGNNALLT
PQEELALARRVVAGEFEARQKMIEHNLRLVVNIAKHYINRGLALLDLIEEGNIGLMHALE
KFDPERGFRFSTYATWWIRQSIERAIMNQSRTIRLPVHVIKELNVYLRASRHLESQIGRE
PTLDEIAHLVGKPVDDVRKVMNLNERMASLDAPLDIDPMLSIGESIPDEQHEEPELQLHN
SQLETFVHDWLSQLNEKQRLVIERRYGLNGYEICTLEELAASLNLTRERVRQIQIEGLEQ
LRRILRRKGISRDFLL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaatcgacatcctggacgagaacgaaattctcgatgaggacaatggcgaa
gaaggcgcggccgaagcggaagccgaggaaaacgttgacagcaccgcggccttcgaagac
gtagtggccgatgtcacccagatctatctgaacgatatcggcaacaacgcgctcttgacg
ccgcaggaagaattggcgctggcccgccgcgtggtggctggcgaattcgaagcccggcag
aagatgatcgagcacaatcttcggctggtggtcaacatcgccaagcattacatcaaccgc
ggcctggcgctgctggatctgatcgaggaaggcaatatcggcctgatgcacgcgctggag
aagttcgatcccgagcgcggcttccgcttctccacctatgccacctggtggatacgccag
agcatagagcgggcgatcatgaaccagtcgcgcaccatccgcctgccggtgcacgtgatc
aaggaactgaacgtctacctgcgcgcctcgcgccatctggaaagccagatcggccgcgag
ccgactcttgatgaaatcgcccatctagtgggcaaaccggtggacgatgtgcgcaaggtg
atgaacctgaacgagcgcatggcctcgctggacgcgccgctggacatcgaccccatgctg
tccataggcgagtcgattcccgacgagcaacatgaggagcccgagctgcagctgcacaac
agccagctggaaaccttcgtccatgactggctgagccagctcaacgagaagcaaaggctg
gtgatagagcggcgctacggcctcaacggctacgaaatctgtacgctggaggagttggcc
gcctcgctgaacctgacccgggaacgcgtgcggcagattcagatcgagggcctggagcaa
ctgcgccgcatcctgcgccgcaagggcatctcccgcgacttcctgctgtaa
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