Chromobacterium paludis: FYK34_13235
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Entry
FYK34_13235 CDS
T06224
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00300
Lysine biosynthesis
chrm00470
D-Amino acid metabolism
chrm01100
Metabolic pathways
chrm01110
Biosynthesis of secondary metabolites
chrm01120
Microbial metabolism in diverse environments
chrm01230
Biosynthesis of amino acids
Module
chrm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FYK34_13235 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FYK34_13235 (lysA)
Enzymes [BR:
chrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FYK34_13235 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QEL56455
UniProt:
A0A5C1DI68
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All DBs
Position
2816379..2817611
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AA seq
410 aa
AA seq
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MPPFDHRQLAAIAQQYGSPLWVYDAETIRSRIAELKAFDTIRYAQKANSNTHILRLMRAE
GVKVDAVSLGEIERALAAGYQAGGGEPSDIVFTADVLDRATLEKVAETGIPLNAGSIDML
RQLGERSPGHAVWLRINPGFGHGHSQKTNTGGENSKHGIWHGDLAEALQTAKQYGLRLIG
IHMHIGSGVDYRHLARVCDAMVELVARLDCDIEAISAGGGLSIAYREGDARIDTAHYFQL
WDAARQRIAARLGHPVRLEIEPGRFLVAESGALLAEVRAIKNMGSRHFVLVDAGFNDLMR
PSLYGSYHRITLLTADGAEKRGAIDTVVAGPLCESGDVFTQQAGGTVETRALPPAEVGDL
MVFHDAGAYGATMSSNYNSRPLLAEVLLEGGAARLIRRRQTMAELLALEA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccacccttcgaccatcgccaactcgccgccatcgcccagcaatacggctccccgctc
tgggtctacgacgccgagaccatacgcagccgcatcgccgagctgaaggccttcgacacc
atacgctacgcacagaaggcgaactccaacacccacatcctgcggctgatgcgcgccgaa
ggcgtcaaggtggacgcggtatcgctgggcgagatcgagcgcgcgctggccgccggctac
caggccggaggcggagagccttccgacatcgtcttcaccgccgacgtgctggaccgcgcc
acgctggaaaaggtggcggaaacgggcatcccgctgaatgccggctccatcgacatgctg
cgccagctaggcgaacgttcgcccggccatgcggtgtggctgcgcatcaatccgggcttt
ggccacggccatagccagaaaaccaataccggcggcgaaaacagcaaacacggcatctgg
cacggcgatctggcggaggcgctgcaaaccgcgaagcaatatggactgcgcctgatcggc
atccacatgcacatcggctccggcgtggattatcgccacctggcgcgcgtgtgcgacgcc
atggtggaactggtggcgcgcctggactgcgacatcgaggccatttccgccggcggcggc
ttgtccatcgcttatcgcgaaggcgacgcccgcatcgacaccgcccattacttccagcta
tgggatgccgcgcggcagcgcatcgccgccaggcttggccacccggtgcgcctggaaatc
gagcccggccgcttcctggtggcggagtctggcgcgctgctggcggaggtgcgcgcgatc
aagaatatgggcagccgccatttcgtgctggtggacgccggcttcaacgacctgatgcgg
ccctccttgtacggcagctaccaccgcatcaccctgctgacggccgacggcgcggagaaa
cgcggcgccatcgacaccgtggtggccggaccgttgtgcgagtcgggcgacgtcttcacc
cagcaggccggcggcacggtggaaacgcgcgcgctgccgcccgctgaagtcggcgacctg
atggtgttccacgacgccggggcctacggcgcgaccatgtcctccaactacaacagccgc
ccgctgctggcggaagtgctgctagaaggcggcgccgcgcggctgatccgccgccgccag
accatggccgagctgctggcgctggaagcctaa
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