KEGG   Chromobacterium paludis: FYK34_15070
Entry
FYK34_15070       CDS       T06224                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chrm  Chromobacterium paludis
Pathway
chrm03030  DNA replication
chrm03410  Base excision repair
chrm03420  Nucleotide excision repair
chrm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FYK34_15070 (polA)
   03410 Base excision repair
    FYK34_15070 (polA)
   03420 Nucleotide excision repair
    FYK34_15070 (polA)
   03440 Homologous recombination
    FYK34_15070 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chrm03032]
    FYK34_15070 (polA)
   03400 DNA repair and recombination proteins [BR:chrm03400]
    FYK34_15070 (polA)
Enzymes [BR:chrm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FYK34_15070 (polA)
DNA replication proteins [BR:chrm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FYK34_15070 (polA)
DNA repair and recombination proteins [BR:chrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FYK34_15070 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FYK34_15070 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Isochorismatase
Other DBs
NCBI-ProteinID: QEL56788
UniProt: A0A5C1DLV7
LinkDB
Position
complement(3188418..3191195)
AA seq 925 aa
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVEFDYSACVFDAK
GKTFRDDLYPEYKANRPSMPEELASQITAVHEVVQASGWPMLVVPGVEADDVIGTLARAA
AAAGMKVIVSTGDKDMAQLVTPDITLVNTMTNELLDEAGVKEKFGVPPALIIDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEQYGSLDAIVAQADSVGGKVGENLRAALDWLPMGKRLITI
DCAVDLTTDLPHGLPGLQHGQKDKPRLAELFLDLGFRTFYREVTEGSEMPAIAQRQEDTP
AAQNDLFGGADEPATVAPSGAANIERHYETILNEAQLDAWLEKLAAAKVVSFDTETTSLD
PMQARIVGVSFSVEAGHAAYLPLAHHYAGAPEQLPLDAALARLKPWLEDADKKKCGQNLK
YDSHVLANHGIALRGIVDDSMLASYVLESHQRHNMDDLARRHLGEDTVSYEDICGKGAKQ
IGFGEVDVDIAANYAAEDADITLRLNQHFANQLSGDLEKVYRDIELPVAEVLFKMERHGV
LIDRDKLAAQSHQLGSQMLELEQQAYELAGQPFNLNSPKQLQEILFGKLAIPTKGVKKTP
SGGYSTDESVLEQLALDHPLPKRILEYRGLAKLKSTYTDKLPALIYPQTGRVHTTYAQAV
AITGRLSSNDPNLQNIPVRTAEGRRVREAFIAPAGWQIVSADYSQIELRIMAHLSGDEGM
LQAFASGEDIHRATAAEVFGVDLGAVTSDQRRAAKAINFGLIYGMSAFGLAAQLDIERSA
AQQYIDRYFMRYPGVAEYMQTTREKAREQGYVETVFGRRLYLPDIKLSNPARRAGAERAA
INAPMQGTAADLIKLAMIAVQNWLEGDSLQSKLIMQVHDELVLEVPQAELDRVKRRLPEI
MAGAAELKVPLLAEVGAGDSWEAAH
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgaaaacattgttattaattgacggctcttcttacttgtaccgcgcctttcacgcgatg
cccgatttgcgatccccggatggccgcccggtgggggctgtctatggcatggtcaacatg
ctcaggcggctggagaaggaagttgaattcgattatagcgcctgcgtcttcgacgcgaag
ggcaagaccttccgcgacgacctgtaccccgaatacaaggccaatcgcccgtccatgccc
gaggagctggcttcccagattacggcggtccatgaggtggtgcaagcttccggctggccc
atgctggtggtgcctggggtggaggcggacgatgtgatcggcacgctggcgcgcgcggcg
gcggcagccggcatgaaggtgatcgtctccaccggcgacaaggacatggcccagctggtg
acgccggacatcaccctggtcaacaccatgaccaacgagctgttggatgaggcgggcgtc
aaggagaagttcggcgtgccgcctgcgctcatcatcgactacctgaccctgatcggcgac
aaggtggataacgtgcccggcgtcgacaagtgcgggcccaagaccgcggtcaagtggctg
gagcagtacggcagcctggacgccatcgtcgcccaggccgacagcgtgggcggcaaagtg
ggcgaaaacctgcgcgcggcgctggactggctgcccatgggcaagcggctgatcaccatc
gattgcgcggtggatctgacgacagacctgccgcacggtttgcccggcctgcagcacggc
cagaaggacaagccgcggctggccgagctgttcctggacctgggcttccgcaccttctac
cgcgaggtgaccgagggttcggagatgccggccatcgctcaaaggcaggaggatacgccg
gccgcgcaaaatgatctgttcggcggcgccgatgagccggccaccgtcgcgccctccggc
gccgcgaatatcgagcgccattacgaaaccatattgaacgaagcgcagctggacgcttgg
ctggaaaaactggcggcggccaaggtggtgtccttcgacaccgaaaccaccagcttggat
ccgatgcaggcgcgcatcgtcggcgtcagcttctcggtggaggcaggccacgccgcctat
ctgccgctggcgcaccattatgccggcgcgccggaacaattgccgctggacgcggccctg
gccaggctcaagccgtggctggaggacgcggacaagaagaagtgcggacaaaacctgaaa
tacgacagccatgtgctggccaaccacggcatcgccctgcgcggcatcgtcgatgattcg
atgttggcctcctacgtgctggaaagccaccagcgccacaatatggacgacctggcgcgc
cgccatctgggcgaggacaccgtcagctacgaggacatctgcggcaagggcgccaagcag
atcggcttcggcgaggtggacgtcgacatcgccgccaattacgcggccgaagacgccgac
atcacgctgcgcttgaaccagcacttcgccaaccaattgagcggcgatctggaaaaggtc
taccgcgacatcgagctgccggtggccgaggtgctgttcaagatggaacggcatggcgtg
ctgatcgaccgcgacaagctggccgcgcagagccaccagctgggcagccagatgctggag
ctggagcagcaggcgtatgagctggccggccagcctttcaatttgaattcgcccaagcag
ctgcaggaaatcctgttcggcaagctggccatccccaccaagggcgtcaagaagacgccg
agcggcggctattccaccgatgaatcggtgctggagcagctggcgctggaccaccccttg
cccaaacgcattctggaataccgagggctggccaaactgaagtccacgtataccgataaa
ttgcccgcgctgatttatccacagaccggccgcgtgcacacgacttatgcacaggcggtg
gcgatcaccggccgtttgtccagcaacgatcccaatctgcagaacatcccggtgcgcacc
gccgagggccgccgcgtgcgcgaagccttcatcgcgccggccggctggcagatcgtgtcg
gccgactattcgcagatcgagctgcgcatcatggcccacctgtccggcgacgaaggcatg
ctgcaggctttcgccagcggcgaggacatccaccgcgccaccgcggcggaggtgttcggc
gtagatctcggcgcggtgacatcggaccagcgccgcgccgccaaggcgatcaacttcggc
ctgatctacggcatgagcgcgtttggcctcgccgctcagctcgacatcgagcgcagcgcc
gcccagcagtacatcgaccgctacttcatgcgctacccgggcgtggccgagtacatgcaa
accacgcgcgagaaggcgcgcgagcagggctatgtcgaaaccgtgtttggccgtcgtctg
tatctgccggacatcaaactatccaatccggcccgtcgcgccggcgccgagcgcgcggcg
atcaacgcgccgatgcagggcacggcggccgatttgatcaagctggcgatgatcgcggtg
caaaactggctggagggcgacagcctgcaaagcaagctgatcatgcaagtacacgacgaa
ctggtgctggaagtgccgcaggccgagctggatcgggtcaagcgtcgcctgccggaaatc
atggccggcgctgccgaactgaaagtgccgctgctggccgaggtcggggccggcgacagc
tgggaggcggctcactga

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