Chromobacterium paludis: FYK34_17260
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Entry
FYK34_17260 CDS
T06224
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FYK34_17260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_17260
Enzymes [BR:
chrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FYK34_17260
DNA repair and recombination proteins [BR:
chrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FYK34_17260
Prokaryotic type
FYK34_17260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEL57184
UniProt:
A0A5C1DKK3
LinkDB
All DBs
Position
3639971..3640693
Genome browser
AA seq
240 aa
AA seq
DB search
MSSLSYLSPALARVHPDWETVLRQPAVAAKLAGIDRELRQQSEAGKTLFPPAPLVFNALS
YAAPADVKVVILGQDPYHGDGEAMGLSFSVPDGARVPPSLRNIYKELAADLGLGIPASGD
LSHWAQQGVLLLNSVFTVERDKAGSHGKLGWQTVSDALIDAVNAQNPGCVFLLWGNWAQT
KAERIDSSRHLVLTAAHPSPLSASRGFHGCRHFSQVNAWLLARGRQPVRWAPAAAQNSLF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctctaagctatctatcccccgccctggcccgcgtccatccggactgggaaacc
gtgctgcgccagcccgccgtcgccgccaaactggccggcatagaccgcgaactgcgccaa
caaagcgaggccggcaagaccctgtttccgcccgcgcccctggtgttcaacgcgctgagc
tacgccgcgccggcggacgtcaaggtggtgatattgggccaggatccctaccacggcgac
ggcgaggccatgggcctgtccttctccgtgccggacggcgcgcgcgtgccgccgtccctg
cgcaacatctacaaggagctggcggccgacctgggcctgggcattccggccagcggcgac
ctcagccactgggcgcagcagggcgtgctgctgctgaacagcgtgttcaccgtggagcgc
gacaaggccggcagccacggcaagctgggctggcagacggtcagcgacgcgctgatcgat
gccgtcaacgcgcagaatcccggctgcgtcttcctgctgtggggcaactgggcgcagacc
aaggccgagcgcatagacagcagccgccacctggtgctgaccgccgcccacccctcgccc
ttgtccgccagccgcggcttccacggctgccgccacttctcccaggtcaacgcctggctg
ctcgcccgcggccgccagccggtacgctgggcgcccgccgccgcgcaaaacagcctgttc
taa
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