Chromobacterium paludis: FYK34_17375
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Entry
FYK34_17375 CDS
T06224
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03420
Nucleotide excision repair
chrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FYK34_17375
03430 Mismatch repair
FYK34_17375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_17375
Enzymes [BR:
chrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FYK34_17375
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FYK34_17375
MMR (mismatch excision repair)
Other MMR factors
FYK34_17375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
RskA_C
Motif
Other DBs
NCBI-ProteinID:
QEL57204
UniProt:
A0A5C1DKM9
LinkDB
All DBs
Position
complement(3661395..3663536)
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AA seq
713 aa
AA seq
DB search
MSDLLAGLNPEQLRAVTWPAKSALVLAGAGSGKTRVLTTRIAWLLSTAQTSPAGILAVTF
TNKAAREMQTRLSALVPVNVRNMWIGTFHGLCNRFLRIHYRDAGLPQTFQILDSADQQAA
IKRLLKSLELSDEKYPPRAVQSFINGNKEAGLRAESLPPALNPYEAKLVELYAAYDAQCR
REGVVDFAELLLRSYELLSRNEALRAHYSSRFSHILVDEFQDTNRLQYAWLKLLAGEHGA
LFAVGDDDQSIYAFRGAEVGNMRALLSDFHVAEPVRLEQNYRSVGNILNAANALIEQNDG
RLGKNLWTDAGEGEKIRFFQAGSDGEEAEFIIDEVKSLHRDGLALSDIAVLYRSNAQSRL
LEHVLVNAQIPYRIYGGLRFFERQEIKHALAYLRLVANPDDDNALLRVINVPTRGIGARS
VENLQAAGREQGISLWQAACGAGSGRTAAKIGEFVLLIERLREQSRDFSLAETISLVIDR
SGLRDMYEQDKKDGEERLANLDELVNAAASFLPDQPEQALTEFLSAASLEAGEHQADAGS
DALQLMTVHAAKGLEFDAVFVSGLEEGLFPHENSIMDGKGLQEERRLMYVAITRARKRLY
LSSAQSRMLHGQSRYPIPSRFIDEIPAELIHALSATVKAPVAAWQARPAAAAPRRQAQNA
YGLSIGQAVSHAKFGLGVVIDAEGNGEDVRLQINFAEHGVKWLDLRYAKLTPA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctgttagccggcctcaatcccgaacaactgcgcgccgtcacctggcccgcc
aagagcgcgctggtgctggccggcgccggcagcggcaagacccgggtgctgaccacccgc
atcgcctggctgttgtccaccgctcagacctcgccggccggcatcctggcggtgaccttc
accaacaaggccgcgcgcgagatgcagacccggctgtccgctctggtgccggtcaatgtc
cgcaatatgtggatcggcaccttccacggcctgtgcaaccgcttcctgcgcatccactac
cgcgacgccggcctgccgcaaaccttccagatcctggactccgccgaccagcaggccgcg
atcaagcgcctgctgaaaagcctggagctgtcggacgagaaatacccgccgcgcgcggtg
caaagcttcatcaacggcaataaggaggccggcctgcgcgccgagtcgctgccgccggcg
ctgaacccgtacgaagccaagctggtggagctgtacgccgcctacgacgcccagtgccgg
cgcgaaggcgtggtggacttcgccgaactgctgctcagaagctacgagctgttgtcccgc
aacgaggcgctgcgcgcccattacagcagccgcttcagccatatcctggtggacgagttc
caggacaccaaccgcctgcagtacgcctggctcaagctgctggccggcgagcacggcgcg
ctgttcgccgtgggcgacgacgaccagagcatctacgccttccgcggcgcggaagtcggc
aatatgcgcgcgctgctgtccgacttccacgtggccgaaccggtgcgactggagcagaac
taccgctccgtgggcaatatcctgaacgccgccaatgcgctgatcgaacagaacgacggc
cgcctgggcaagaacctgtggaccgatgccggcgagggcgaaaaaatccgcttcttccag
gccggcagcgacggcgaggaggcagagttcatcatcgacgaggtcaagagcctgcaccgc
gacggcctggcgctgtccgacatcgccgtgctctaccgttccaacgcccagtcgcggctg
ctggagcatgtgctggtcaacgcccagattccctaccgcatctatggcggcctgcgcttc
ttcgaacgccaggaaatcaagcacgcgctggcgtatctgcgcctggtggccaacccggac
gacgataacgcgctgctgcgcgtgatcaacgtgccgacgcgcggcataggcgcgcgcagc
gtggaaaacctgcaggccgccggccgcgagcagggcatctcgctgtggcaggccgcctgc
ggggccggcagcggccgcaccgccgccaagatcggcgagttcgtgctgttgatcgagcgt
ctgcgcgagcagagccgcgacttcagcctggccgaaaccatcagcctggtcatagaccgc
agcggcctgcgcgacatgtacgagcaggacaagaaagacggcgaggagcggctggccaac
ctggacgagctggtcaacgccgccgccagcttcctgcccgaccagcccgagcaggcgctg
accgaattcctgtccgccgccagcctggaagccggcgagcaccaggccgacgccggcagc
gacgccttgcagctgatgacggtgcacgcggccaagggcctggagttcgacgccgtcttc
gtcagcggcctggaagaaggcctgttcccgcacgaaaacagcatcatggacggcaagggc
ctgcaggaagagcggcggctgatgtacgtggccatcacccgcgcgcgcaagcggctgtat
ctgtccagcgcgcaaagccgcatgctgcacggccagagccgctatcccatcccgtcgcgc
ttcattgacgagattccggccgaactgatccatgcgctgtctgctacagtgaaagcaccc
gttgcagcctggcaggcccgcccggcggcagccgcgccgcgccgccaagcgcaaaacgcc
tacggcctgtccatcggccaagccgttagccacgccaaattcggactgggcgtcgtgatc
gatgccgaaggcaacggcgaagacgtgcgcttgcagatcaatttcgccgaacatggcgta
aagtggctggatctgcgctacgccaagctgacgccggcctga
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