Chromobacterium paludis: FYK34_17865
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Entry
FYK34_17865 CDS
T06224
Name
(GenBank) DEAD/DEAH box helicase
Organism
chrm
Chromobacterium paludis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
QEL57297
UniProt:
A0A5C1DMI0
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Position
complement(3767444..3771529)
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AA seq
1361 aa
AA seq
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MSASPLTARFDALSEIQQAVLFALLMSLSGRNKTALLALLKSMGVRASATRQLDHAALAG
PLDELLAQEWLGLSQAGLYRMRRLRHNEALLGLWRRGAFARWKDGVKAYLDGQRPSWGQT
GTEHCPIEMWQALLEGDVASLIRWLPIWESHSRMKQHPPLAEMLLADAAGQQLLAALPAT
AQTALLLPVLISQGWEMQAAAPAYQYVIGRLEHDFKDQLALQDAAGLLAIWRGELDLLGE
ICPEGLVLVPAIALHLAQGQPEEALQSIESWLAQVRAQTRKRKLELPPNLNLLYALALVA
KGDIAGNKTLAELIKHGIKHQYGEAYPLLLRLQWQSEGNAKVALEREPRLQGLDGLVCAL
LRYWLDDPAANTPQWEAALQMFAKQLRRDGYALAAEEIDALMEAQFGQPRAQSDWHSQRK
LAPWFQLYQKQAAWQHALNALALLGKPAPQADKPAAESRLAWLLTLGRGGPTLEPREQKL
SAKGLWSKGRAVALKRLREESDSFDYLLEQDREIIGHIRQNYDYYYGGSHYELDGEAALP
ALAGHPAVFWADAPDTRLDVAIGQVALQLKESASQIRLRLMPDKIRPDSALVWDKETPTR
LLVYPVSDEARQIAAIVGKELCIPPQGKKQLIDAIGGIAPLLPIHSDLPELAAHIDSVPA
DSKLYAHLLPLNEGLRLQLLVRPLPGGGWQRPGQGMENVLGEQDGKPVQAVRDLKAEKKA
LKTVEAACPALRLADSDGREWQLDEPQAALEMLSQLHDIDPALLECVWPEGERMRIQGRR
EMGGMRFALQSHGGWFELSGEVALDDGTVLQLRQLLQLMRHSRGRFVKLGEGDWLALGES
LRRRLEQLALLADGDGRQGVRFHALTAPLLAELQAEAGAFEADSGWQKQLRQLESLRDWH
PAAPSTLQAELRDYQQEGYRWLSRLARWGVGACLADDMGLGKTVQTLALLLERAPDGPQL
VAAPTSVAMNWLAEAARFAPTLNLRAFHQNRDLSGLGPFDVVVTSYGLLQQEADAFTAQH
WRSVVLDEAQAIKNAQTKRSQAAMALNADFRLAVSGTPLENHLGELWNLFRFLNPCLLGS
QEQFNQRFAAPIENGDDAARKALKALIQPFILRRNKTQVLDELPPRTEITHKVTLSRDEM
HLYEALRQEAMDKLDALGDEDGKPLQVLAEITRLRRFCCHPSLAVKNSALPGSKLAACAE
IIDELLENRHKALVFSQFVDHLTIVREYLDQQGIAYQYLDGATSAKERKNRVDAFQAGEG
DIFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVAEHT
IEEQIVALHAKKRDLADSLLEGGEVSAKLDADALLALLKGA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcccccctgactgcccgctttgatgccctaagcgaaatccagcaagcggta
ttgttcgccctgctgatgtcgctgtccgggcgcaacaagaccgccttgctcgccctcctc
aaaagcatgggcgtgcgcgccagcgccacccgccagctcgatcacgccgcgctggccggc
ccgctggacgaactgctggcgcaggaatggctgggcctcagccaggccggtttgtaccgc
atgcggcggctgcgtcacaacgaggccttgctgggtttgtggcggcgcggcgcgtttgcc
cgctggaaagacggcgtcaaagcctatctggatggccagcggcccagctggggccagacc
ggaaccgaacactgccccatcgaaatgtggcaggccctgctggaaggcgatgtcgccagc
ctgatacgctggctgccgatctgggaatcccacagccggatgaagcagcatccgccgctg
gcggagatgctgctggccgacgcagccggccaacagctgttggcagccttgccggccacg
gcccaaacggcgctgctgctgccggtgctgatcagccagggttgggaaatgcaagccgcc
gcgccggcctatcaatacgtcatcggcaggctggagcatgacttcaaggaccagctggcg
ctgcaggacgcggccggactgctggccatctggcgcggcgagctggacctgctgggcgaa
atctgtccggaaggactggtcctggtgccggccatcgccctgcatctggcacagggccaa
cccgaagaagccctgcaatccatcgaatcctggctggcccaggtgcgcgcgcaaacgcgc
aagcgcaagctggaactgccgcccaacctcaacctgctgtacgcgctggccctggtggcc
aaaggcgacatcgccggcaacaagaccctggccgagctgatcaagcacggcatcaagcac
caatatggcgaagcctatccgctgttgctgcggctgcaatggcaaagcgagggcaatgcc
aaggtggcgctggagcgggaaccgcgcttgcaaggcctggatggcctggtctgcgcgctg
ctgcgctactggctggatgatccggcagccaacacgccgcaatgggaagcggcgctgcag
atgttcgccaagcagctgcgccgtgatggctacgcgctggcggccgaggaaatcgacgcg
ctgatggaagcgcagttcggccagccgcgcgcgcagtcggactggcatagccagcgcaag
ctggcgccgtggttccagctgtaccagaagcaggccgcctggcaacacgcgctcaatgcc
ctggccttgctgggcaagcctgctccgcaggcggacaagccggcggcggagtcgcgcctg
gcctggttgctgaccctgggccgcggcggcccgacgctggagccgcgcgagcagaagctg
tccgccaagggcctgtggagcaagggccgcgccgtggcactcaagcgcctgcgcgaggaa
agcgacagcttcgactacctgctggagcaggaccgggaaatcatcggccatatccggcaa
aactatgattactactacggcggcagccactacgaactggatggcgaggccgcgctgccg
gcgctggcgggccacccggcggtattctgggccgatgcgccggacacccggctcgatgtg
gccatcggccaagtcgccttgcagctgaaagaatcggcaagccagatccggctgcggctg
atgccggacaagatccgcccggatagcgccctggtctgggacaaggaaacacccacccgg
ctcttggtctatcccgtcagcgacgaggcgcgccagatcgccgccatcgtcggcaaagag
ttatgcattccgccgcaaggcaagaaacagctgatcgacgccatcggcggcatcgccccc
ttgctgcccatccactccgacctgccggagctggccgcccacatcgacagcgtgcccgcc
gacagcaagctgtacgcccacctgctgccgttgaacgaaggcctgcgcctgcaattgctg
gtgcggccgctgcctggcggcggctggcagcggccgggccagggcatggaaaacgtgctg
ggcgaacaggacggcaaaccggtgcaggcggtgcgcgatctcaaggcggagaaaaaagcg
ctgaaaaccgtggaggccgcctgcccagcgctgcgcctggccgacagcgacggccgcgaa
tggcagctggacgaaccgcaggcggcgctggaaatgctcagccaactgcacgacatcgac
cctgccttgctggagtgcgtctggccggaaggcgagcgcatgcgcatccagggccggcgc
gaaatgggcggcatgcgcttcgccttgcagtcgcacggcggctggttcgaactctcgggc
gaggtggcgctggacgacggcaccgtgctgcagctgcgtcaattgctgcagctgatgcgc
cacagccgcggccgcttcgtcaaactgggcgagggcgactggctggccttgggcgaaagc
ctgcgccgccgcctggaacagctggcgctgctggccgatggcgacggcaggcagggcgtg
cgcttccatgcgctgacggcgccgctcctggccgagctgcaggcggaagccggcgccttc
gaggccgacagcggctggcaaaaacagctgcggcaactcgaatccctgcgcgactggcat
cccgccgcgccctccaccctgcaagccgagctgcgcgactaccagcaggaaggctaccgc
tggctgtcccggctggcgcgctggggcgtcggcgcctgcctggccgacgacatgggcctg
ggcaagacggtgcaaaccctggcgctgctcttggaacgcgcgccggacggcccgcagctg
gtggcggcgcccacctcggtggcgatgaactggctggcggaagccgcccgcttcgccccc
acgctgaacctgcgcgccttccaccagaaccgcgacctgtccgggctgggacccttcgat
gtggtggtgaccagctacggcctgctgcagcaggaagccgacgccttcaccgcccagcat
tggcgcagcgtggtgctggacgaggcgcaggccatcaagaacgcgcagaccaagcgttcc
caggccgccatggcgctgaacgctgacttccgcctggccgtcagcggcacgccgctggaa
aaccacctgggcgagctgtggaacctgttccgtttcctcaacccctgcctcttgggcagc
caggaacagttcaaccagcgcttcgccgcgccgatcgaaaacggcgatgacgccgcgcgc
aaggcgctcaaggcgctgatccagcccttcatcctgcgccgcaacaagacccaggtgctg
gacgagctgccgccgcgcaccgaaatcacccacaaggtcacgctcagccgcgacgagatg
cacctgtacgaagccctgcgccaggaggcgatggacaagctggacgcgctgggcgacgag
gacggcaaaccgctgcaggtgctggcggaaatcacccgcctgcgccgcttctgctgccac
ccctcgctggccgtcaaaaacagcgcgctgcctggcagcaagctggccgcctgcgcggaa
atcatcgacgagctgctggaaaaccgccacaaggcgctggttttcagccaattcgtcgat
catttgaccatcgtgcgcgaatatctggatcaacaaggcatcgcctaccagtacctggac
ggcgccaccagcgccaaggagcgcaagaaccgcgtggacgccttccaggccggcgagggc
gatatcttcctgatcagcctgaaagccggcggcaccggcctcaacctcaccgccgccgac
tacgtgatccacctggacccgtggtggaacccggcggtggaagaccaggcctcggaccgc
gcgcaccgcatcggccagcaaaggccggtgacggtgtaccggctggtggccgagcacacc
atagaagaacagatcgtcgccctgcacgccaagaagcgcgacctggccgacagcctgctg
gaaggcggcgaagtcagcgccaagctggacgccgacgcgctgctggccttgctgaaaggc
gcgtga
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