Chromobacterium paludis: FYK34_18490
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Entry
FYK34_18490 CDS
T06224
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00550
Peptidoglycan biosynthesis
chrm01100
Metabolic pathways
chrm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FYK34_18490 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FYK34_18490 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chrm01011
]
FYK34_18490 (mrdA)
Enzymes [BR:
chrm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FYK34_18490 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
chrm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FYK34_18490 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MP_p6
Motif
Other DBs
NCBI-ProteinID:
QEL57414
UniProt:
A0A5C1DL76
LinkDB
All DBs
Position
complement(3905541..3907481)
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AA seq
646 aa
AA seq
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MRRPTRFKNPQNDEEQFELRLIIAYALIIVMFLTLLARFVWLQVLQHDHFSTLAQNNRIS
LVPILPNRGLIVDRNGVVLAQNYSAYTLELTPSKTPDLDATIAKLKTLADVTPRDEKLFK
KLLAESKNFEAVPLKVKLSDEEAARVAAHAYELPGVEVKARLFRDYPFKEMTSHVLGYIG
RINQKDKERLDEEDKTTNYKGSNYIGKTGLEAVYEDDLHGQVGFEEVETDSGGRAVRTLR
RTPPVNGNTLKLALDIRLQEMADKLFGQRRGALVAIDPATGGVLAFLSKPGFDPSLFIDG
IDSQTWKDLNEDWQKPLVNRALRGTYPPGSTFKPFMAMAALVTHSIGMHDIRPAPGYFTL
PGSSHQFRDSKKQGNGMVNLQRAITVSSDTFFYKLAWDMGIDKIYPVVGSFGLGSKTGID
LDGEASGVLPSKEWKARRFARYKPEVRRWYPADVVSVGIGQGFNAYTPLQMANATAIMAN
NGEAFKPHLVQQIVNSKTGESRLIEPKPEKQLPYPQEYFDYIKEGMRGVMISGTGARVGV
GLQYSMAGKTGTAQVVAIKQGAKYNASALAEQYRDHSWFIAFAPVEKPKIAVAIIVENAG
FGAAAAAPIARGLFDFYLLGKVPKDMDGLLKTVPQENGDASENAAH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcccgacccgcttcaagaacccgcagaacgacgaggaacagttcgagctgcgg
ctgatcatcgcctacgcgctgatcatcgtgatgtttctcaccctgctggcccgcttcgtc
tggctgcaggtgctgcagcatgaccacttctccaccctggcgcagaacaaccgcatctcg
ctggtgcccattctgcccaatcgcggcctgatcgtggaccgcaacggcgtggtgctggcg
caaaactattcggcctacacgctggagctgaccccgagcaagacaccggacctggacgcc
accatcgccaagctcaagaccctggccgatgtcaccccgcgcgacgaaaagctgttcaaa
aaactgctggcggaaagcaagaacttcgaggcggtgccgctgaaagtgaagctcagcgac
gaggaagccgcccgcgtggccgcccacgcctatgagctgcccggcgtcgaggtcaaggcg
cggctgttccgcgattatcccttcaaggaaatgaccagccatgtgctgggctatatcggc
cgcatcaaccagaaagacaaagagcggctggatgaagaagacaagaccaccaattacaag
ggcagcaactacatcggcaagaccggcctggaagccgtgtacgaagacgatctgcacggc
caggtcggtttcgaggaggtggagaccgactccggcggacgcgcggtgcgcacgctgcgc
cgcacgccgccggtcaacggcaacacgctgaagctggcgctggacatccggctgcaggaa
atggcggacaaactgttcggccagcgccgcggcgcgctggtggcgatagacccggccacc
ggcggcgtgctggcctttttgtccaagcccggcttcgatcccagcctgttcatagacggc
atcgacagccagacctggaaagacctcaacgaggactggcagaaaccgctggtcaaccgc
gccctgcgcggcacctacccgcccggctccactttcaagcccttcatggcgatggcggcg
ctggtcacgcacagcataggcatgcacgacatccgcccggcgcccggctatttcaccctg
cccggctccagccaccagttccgcgacagcaagaagcagggcaacggcatggtcaatctg
caacgcgccatcaccgtgtccagcgacactttcttctacaagctggcctgggacatgggc
atagacaagatctacccggtggtcggctccttcggcctgggcagcaagaccggcatcgac
ctggacggcgaggccagcggcgtgctgccgtccaaggagtggaaagccaggcgcttcgcc
cgctacaaaccggaagtgcggcgctggtatccggccgacgtggtcagcgtgggcatcggc
cagggcttcaacgcctacaccccgctgcagatggccaacgccaccgccatcatggccaat
aacggcgaggccttcaaaccgcacctggtgcagcagatcgtcaattccaagaccggcgag
agccggctgatcgagcccaagccggagaagcagctgccgtatccgcaggaatacttcgac
tacatcaaggaaggcatgcgcggcgtgatgatttccggcaccggcgcgcgcgtcggcgtc
ggcctgcagtattccatggccggcaagaccggcaccgcccaggtggtggcgatcaagcag
ggcgccaagtacaacgcctcggcgctggccgagcaataccgcgaccacagctggttcatc
gccttcgcgccggtggagaaacccaagatcgccgtggccatcatcgtggaaaacgcaggc
ttcggcgccgccgccgccgcccccatcgcgcgcggcctgttcgacttctacctgctgggc
aaggtgcccaaggacatggacggcctgctgaagaccgtgccgcaggaaaacggagacgca
agtgaaaacgccgctcattag
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