Chromobacterium paludis: FYK34_19930
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Entry
FYK34_19930 CDS
T06224
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FYK34_19930 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_19930 (mutM)
Enzymes [BR:
chrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FYK34_19930 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FYK34_19930 (mutM)
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FYK34_19930 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF1631
DUF2688
DUF7373_C
Auto_anti-p27
RNHCP
Motif
Other DBs
NCBI-ProteinID:
QEL57673
UniProt:
A0A5C1DMA5
LinkDB
All DBs
Position
complement(4184780..4185592)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGVAPHLEGQTLLGAVVRQPALRWPVPPDLDHILRGETILAVRRRAKYL
LLACQHGTLLIHLGMSGSLRVMPAGTPPQKHDHLDLLLDGRLLRYRDPRRFGAVLWHVGP
IERHPLLNALGPEPLSAAFDGAALFEAMRRRQSAIKLAIMDNHIVVGVGNIYANEALFHA
GIAPTRAANALTRGDCDRLATEIKAVLMRAIDAGGSTLRDFVDSDGKPGYFQQSYMVYGR
QEAPCRRCGTPIRHIRQGQRSTYYCPLCQP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcctgaagtcgaaacgacccgtcgcggcgttgcgccgcacctggagggt
cagaccctgctcggcgccgtcgtacgccagcccgcgttacgctggcccgtgccgccggac
ctggaccatatcctccgcggcgaaaccattctggccgtgcggcgtcgcgccaagtatctg
ctgctggcgtgccaacacggcaccttgctgatccatctgggcatgtccggcagcctgcgc
gtgatgccggccggcacgccgccgcagaaacacgaccacctggacctgctgctggacggc
cggctgctgcgctaccgcgatccgcgacgcttcggcgccgtgttgtggcatgtcggaccg
atagagcggcatccgctgctgaacgcattggggccggagccgctgtccgccgcgtttgac
ggcgcggcgctgtttgaagccatgcgtcgccgccagagcgccatcaagctggccatcatg
gacaaccatatcgtggttggggtcggcaatatctatgccaatgaggcgctgttccacgcc
gggatcgcccctacccgcgccgccaacgcattgacgcgcggcgattgcgaccggctggcg
acggaaatcaaggccgtgctcatgcgcgccatcgacgcgggcggcagcacgctgcgcgac
tttgtcgacagcgatggcaagcccggctacttccaacaaagctatatggtgtacggccgg
caagaggcgccttgccgccgttgcggcacgcccatccgtcatatccgccagggacagcgc
agcacttactattgcccgctgtgccagccgtga
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