Christiangramia sp. OXR-203: T8I65_01800
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Entry
T8I65_01800 CDS
T11486
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
chrn Christiangramia sp. OXR-203
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
HTH_30
AAA_22
AAA_2
Mg_chelatase
HTH_50
nSTAND3
FrvR_4th
HTH_29
AAA_7
AAA_3
Rap1_C_Sp
Motif
Other DBs
NCBI-ProteinID:
WPY98962
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Position
382362..383720
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AA seq
452 aa
AA seq
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MSKVLVVEDDVAFGTMLKTFLEKREYKVELVFSAAEAFNKIEKSNFELVLTDVRLPDHDG
LEILKRVKAKDIATQVIVMTSYAEISMAVNAMKEGAFDYVSKPFRPESILQTIENALRTK
VVAPKEVAAKPAKKASKSSSTTQRLDLVEGVSEPSRRLADYVELVSPTNMSVLITGESGT
GKEQVAKSIHLESKRRDAPFIAVDCGAIPKEIASSEFFGHIKGSFTGAINDKTGHFEAAN
GGTLFLDEIGNLSYELQVQLLRALQERRVKPVGSNNEIEVDIRVVTATNEDLSNAVKEGD
FREDLYHRLNEFSIKIPALRERKEDLMLFANHFLDEANKDLEKNVLGFTDKAIDAFKNYN
WPGNLRELRNMVKRAVLLTQEDLIPLKVLPHEIATSSRSTENDYGLFKNKNEEQLILDAL
EKTDGNKSKAARMLSIDRKTLYNKLKQYGIKL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagttctggtcgttgaagacgatgttgccttcggtactatgctcaaaaccttt
ttagagaaaagggagtataaagtcgagctggtattttctgcagctgaagcattcaataag
attgaaaaaagcaactttgaacttgtgcttacagatgttcgtctaccagatcatgatggc
cttgagatcctgaaaagggttaaagctaaggacatcgctactcaggtgatcgtaatgaca
agttatgctgaaatcagtatggctgtaaatgcaatgaaagaaggtgcattcgattatgta
tccaagccatttcgacctgaatctatattacaaaccatagaaaacgccttgcgtactaag
gtggtagcaccaaaagaagttgccgcgaaacccgcaaagaaagccagcaaatccagttca
acaacacaaagacttgatcttgtagaaggcgttagtgaaccttcccgaagacttgcagat
tatgtggaactggtatccccaacaaatatgtcggttttgatcaccggtgaaagtggtacg
ggaaaagagcaggtggcaaagagcatccatctggaaagtaaaagacgtgatgcgcctttt
atcgccgtagattgtggagcgatcccaaaagagatagcttccagtgaattctttggtcat
attaaaggttcctttactggcgcgataaacgataaaaccggtcactttgaagccgctaac
ggcggaacattgtttcttgatgaaattggaaatcttagttatgaacttcaggtacagtta
ttacgtgcgcttcaggaaagacgtgtgaagcctgttggaagtaataatgaaatagaagta
gatattcgcgtggtaacagcaaccaatgaagatctctcgaatgcagtaaaagaaggtgat
ttccgtgaagatctttaccataggctaaatgaattttcaataaagattccggctcttcgt
gagcgtaaagaagatttgatgctttttgcgaaccattttcttgatgaggcgaataaggac
ctggagaaaaatgtgcttggctttacagataaagcaatagatgcttttaagaactataac
tggcctggtaaccttcgtgaacttcggaacatggtaaaaagagcagtattgctcacccag
gaagatctaattccgctaaaagttttacctcatgagatcgcgacttccagtcgttctacg
gaaaatgattacggtctgttcaagaataagaatgaagaacaactaattcttgatgctctt
gagaaaaccgatggtaataaaagcaaagccgccagaatgctttctatagatagaaagacg
ctttataataagctgaagcagtacggtatcaaactataa
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