Chromobacterium sp. ATCC 53434: CXB49_01335
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Entry
CXB49_01335 CDS
T05234
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXB49_01335 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_01335 (xth)
Enzymes [BR:
chro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CXB49_01335 (xth)
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CXB49_01335 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AUH49576
LinkDB
All DBs
Position
283489..284262
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AA seq
257 aa
AA seq
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MRFATWNVNSLKVRLPQVLQWLADTGVEVLCLQELKMDQDAFPLAEIEAAGYRAAWFGQK
TYNGVAILVKAPLEMTDVVAGIPGYGDEQRRVITATVNGVRVICAYFVNGEAVDSPKYPY
KLEWLSKLEGHVAAELAKHPNLLLLGDYNIAPEDRDVYDPEGWHEQVLCSTPEREAFRRL
IALGLSDSFRLFNQEEKQYSWWDYRQMMFRRNKGVRIDHILVSDALKARAEACEIDKAPR
KWERPSDHTPVVLTLAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgccacctggaacgtcaattcgctgaaagtccgcctgccgcaggtgctgcaa
tggctggccgacaccggcgtcgaagtgctgtgcctgcaggaactgaagatggaccaggac
gccttcccgctggccgagatcgaggccgccggctatcgcgccgcctggttcggccagaag
acctataacggcgtcgccatcctggtcaaggcgccgctggaaatgacggacgtcgtcgcc
ggcattcccggctacggcgacgagcagcgccgggtgatcaccgccaccgtgaacggcgtg
cgggtgatctgcgcctacttcgtcaacggcgaggcggtcgattcgcccaaatacccgtac
aaactggaatggctgtccaagctggagggccatgtcgccgccgagctggccaagcacccg
aacctgctgctgctgggcgactacaatatcgcgccggaagaccgcgacgtctacgatccg
gagggctggcacgagcaagtgctgtgcagcacgccggagcgcgaggccttccgccggctg
atcgcgctgggcctgtccgacagcttccgcctgttcaatcaggaagagaagcagtacagc
tggtgggactaccgccagatgatgttccgccgcaacaagggcgtgcgcatcgaccacatc
ctggtcagcgacgcgctgaaggcccgcgccgaggcctgcgagatcgacaaggcgccgcgc
aagtgggagcgcccgtccgaccataccccggtggtgctgacgctggccgattga
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