Chromobacterium sp. ATCC 53434: CXB49_01460
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Entry
CXB49_01460 CDS
T05234
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03030
DNA replication
chro03430
Mismatch repair
chro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXB49_01460
03430 Mismatch repair
CXB49_01460
03440 Homologous recombination
CXB49_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chro03032
]
CXB49_01460
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_01460
Enzymes [BR:
chro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CXB49_01460
DNA replication proteins [BR:
chro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CXB49_01460
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CXB49_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
DUF2530
Motif
Other DBs
NCBI-ProteinID:
AUH49600
UniProt:
A0A2H5DRE4
LinkDB
All DBs
Position
complement(311556..314990)
Genome browser
AA seq
1144 aa
AA seq
DB search
MNAPRFVHLRLHSEFSITDGIVRLDDAVKRAAGDGMPALGMSDLMNLFGMVKFYKSCRSK
GIKPIVSTDIWLENEEDRDKPYRLMLTAKNREGYRRLCELLTEAFSHNQYRGRAEIKREW
LEAGDNGNLLCLSGAHLGDVGLALAMGQRDEARRRAEYWEKLFPGSFYLELQRLDNPQVE
SVVQATLWLAGELGLPVAATHPIQFMDKDDFKAHEARVCIAEGYTLGDKRRPRAFNECQY
FLGADEMVERFADIPEALANTVEIAKRCNISVVLGKNYLPLFPTPDGMSLDDFLVHEAQR
GLEDRLKQLYPDEAERQQRRPEYDARLKFECDTIIQMGFPGYFLIVADFIQWGKANGCPV
GPGRGSGAGSLVAYSLYITDLDPLKYALLFERFLNPERVSMPDFDVDFCQENRWRVIEYT
RRKYGEEAVSQIATFGTMSSKSVIRDVGRVLDLPFGLCDRLSKLIPLEANKPLSLTKAME
MEAQIGEIIESEGANELIELAMTLEDLTRGIGMHAGGVLIAPGRLTDFCPLYIASGDGAS
PVSQFDKDDVEQIGLVKFDFLGLRNLTIIELAQKYIKATTGEDVDVAHLPLDDKAAYKVF
ATANTTAVFQFESTGMKKMLVEAKPSKFEEIIAFVALYRPGPMDLIPDFIQRMHGAKFEY
LHPLLEPVLAPTYGIMVYQEQVMQSAQVIGGYSLGGADLLRRAMGKKKVEEMVAQRAMFV
EGADKQAIPEAKANEIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHHCAAYMAATMS
TELDNTDQLKVFYDDCQDSKNGIAFLPPDVNHGFYRFVPVNRKEIRYALGAIKGTGESAV
NHIVEAREAGGPFTDLFDFCKRTDKKLVNKRVIEALIRAGAFDAIEPNRALLFANVGLAM
EAAEQEHANANQGGLFDMFGDDVAPAVEMVATRPWNDAVKLAEEKLAIGFYLSDHPFSSY
EKEVRGFIKTTLSRLSPRKEPQLLAGFVTGIRVKVGNRGKMAFVQLDDGTAKLEVSLFAE
SFELNRDKLKEDVVLVVEGKVSEDSFSGGLRIVVDKLLSLGEARSRYARGLALQLPAKPD
IARLKAELHPFKSQDAGSLVRLAYNNGQARGELMLPQEWGVRLDDGLLLALSEWLGEGKV
RVLW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccccgctttgtccatcttcgcctccactcggagttctccatcaccgacggc
atcgtccgcctcgacgacgccgtcaagcgcgccgccggcgacggcatgccggcgctgggc
atgtccgacctgatgaatctgttcggcatggtcaagttctacaagagctgccggagcaag
ggcatcaagcccatcgtctccaccgacatctggctggagaacgaggaggaccgcgacaag
ccttaccggctgatgctgacggcgaagaaccgcgagggttatcgccggctgtgcgagctg
ttgaccgaggctttcagccacaaccagtaccgcggccgcgccgagatcaagcgcgagtgg
cttgaggccggcgacaacggcaatctgctgtgcctgtccggcgcccacctcggcgacgta
ggcctcgcgctggcgatgggccagcgcgacgaggcgcgccgccgcgccgagtactgggaa
aagctgtttccgggatcgttctatctggaattgcagcggctggacaacccgcaggtggaa
agcgtggtgcaggcgacgctgtggctggccggcgagctggggctgccggtggcagccacc
catccgatccagttcatggacaaggacgatttcaaggcccacgaggcgcgggtgtgcatc
gccgagggctatacgctgggcgacaagcgccggccgcgcgccttcaacgaatgccagtac
ttcctcggcgccgacgagatggtcgagcgcttcgccgacattccggaggcgctggccaat
accgtcgagatcgccaagcgctgcaatatctcggtggtgctgggcaagaactacctgccg
ctgttcccgacgccggacggcatgtcgctggacgacttcctggtccacgaggcccagcgc
ggcctggaagaccggttgaagcagctgtacccggacgaggctgagcgccagcaaagacgc
ccggagtacgacgcgcggctgaagttcgagtgcgacaccatcatccagatgggcttcccc
ggctacttcctgatcgtggcggacttcatccagtggggcaaggccaacggctgcccggtg
ggcccgggccggggttccggcgccggctcgctggtggcgtacagcctgtacatcaccgac
ctggacccgctgaagtacgcgctgctgttcgagcgcttcctgaacccggaacgggtgtcg
atgcccgacttcgacgtggacttctgccaggaaaaccgctggcgggtgatcgaatacacg
cgccgcaaatacggcgaggaggcggtcagccagatcgccaccttcggcaccatgtcgtcc
aagtcggtgatacgcgacgtcggccgggtgctggacctgccgttcggcctgtgcgaccgc
ctgtccaagctgatcccgctggaggccaacaagccgttgagcctgaccaaggcgatggag
atggaggcgcagatcggcgagatcatcgagagcgagggcgccaatgagctgatcgaactg
gcgatgacgctggaggacctgacccgcggcatcggcatgcacgccggcggcgtcttgatc
gcgccgggcaggctgaccgacttctgcccgctgtacatcgccagcggcgacggcgcctcg
ccggtgtcgcagttcgacaaggacgacgtcgagcagatcggcctggtgaagttcgacttc
ctgggtctgcgtaacctgaccatcatcgagctggcgcagaaatacatcaaggccaccacc
ggcgaggacgtcgacgtcgcccacctgccgctggacgacaaggcggcctacaaggtgttc
gccaccgccaacaccaccgccgtgttccagttcgagtccaccggcatgaaaaagatgctg
gtggaggccaagcccagcaagttcgaggaaattatcgccttcgtggccctgtaccgcccg
ggcccgatggacctgatcccggacttcatccagcgtatgcacggcgccaagttcgagtac
ctgcacccgctgctggagccggtgctggcgccgacctacggcatcatggtgtaccaggag
caggtgatgcagtcggcccaggtgatcggcggctactcgctcggcggcgccgacctgctg
cgccgcgcgatgggcaagaagaaggtcgaggagatggtggcccagcgcgcgatgttcgtg
gaaggcgccgacaagcaggccattcccgaagccaaggccaacgagatcttcgactatatg
gagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcgctggtggcc
taccacaccgcctggctgaaggcccaccactgcgcggcctatatggcggcgacgatgtcc
accgaattggacaacaccgaccagctgaaggtgttctacgacgactgccaggacagcaag
aacggcatcgccttcctgccgcctgacgtcaaccacggcttctaccgcttcgtcccggtc
aaccgcaaggaaatccgctacgcgctgggcgcgatcaagggcaccggcgagtcggcggtc
aaccacatcgtcgaggcgcgcgaggccggcggcccgttcaccgacctgttcgatttctgc
aaacgcaccgacaagaagctggtcaacaagcgggtgatcgaggcgctgatccgcgccggc
gccttcgacgccatcgagccgaaccgcgcgctgttgttcgccaatgtcggcctggcgatg
gaggccgccgagcaggagcacgccaacgccaaccagggcggcctgttcgacatgttcggc
gacgacgtcgcgccggcggtggagatggtggccacccggccgtggaacgacgcggtcaag
ctggccgaggaaaaactggcgataggcttctacctgtccgaccacccgttctcctcttac
gagaaagaggtgcgcggcttcatcaagaccacgctgtcccgcctcagcccgcgcaaggag
ccgcagctgttggccggcttcgtcaccggcatccgcgtcaaggtgggcaaccgcggcaag
atggccttcgtccaactcgacgacggcaccgccaagctggaagtcagcctgttcgccgaa
agcttcgaattgaaccgcgacaagctgaaggaggacgtggtgctggtggtggagggcaag
gtcagcgaggacagcttctccggcggcctgcgcatcgtcgtcgacaagctgctgagcctg
ggcgaggcgcgcagccgctacgcccgcggcctggcgctgcaactgccggccaagcccgac
atcgcccgcctgaaggccgagctgcatccgttcaagagccaggacgccggcagcctggtg
cggctggcctacaacaacggccaggcacgcggcgagctgatgctgccgcaggaatggggc
gtgcgcctcgacgacggcctgctgctggcgctgtccgaatggctgggcgaaggcaaggtc
cgcgtgctgtggtga
DBGET
integrated database retrieval system
