Chromobacterium sp. ATCC 53434: CXB49_04140
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Entry
CXB49_04140 CDS
T05234
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_04140
Enzymes [BR:
chro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CXB49_04140
DNA repair and recombination proteins [BR:
chro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CXB49_04140
Prokaryotic type
CXB49_04140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUH50065
UniProt:
A0A2H5DSN6
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All DBs
Position
886089..887504
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AA seq
471 aa
AA seq
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MSKRYRAALVWLRRDLRLDDHAAFYHALKHSEAVAPVFVFDAAILDALPRDDRRVDFIHQ
SVAALKAELNALGGDLLVRQGLPVDEIPRLAAALGADAVFCNRDYEPAARERDAEVARRL
SENGVAFHAAKDQVIFDTDEVLTGAGKPFSVFTPYKNAWLKALTPFHLQAYPVRRYLGAL
MPRTPEAMPSLADIGFAASDLSSLPVRPGAAGAEALFADFADRIERYKAQRDFPGVKGVS
YLSVHLRFGTLSIRQLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDVVERAFKPEY
DALPFPNDAEWFDAWRDGRTGYPLVDAAMRQLNRSGYMHNRLRMVAASFLVKDLLIDWRW
GERYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDPDGRFIRRYVPE
LARLPDKLIHAPWLARPEQLADAGVRLGRDYPQPLVDHAVQRELALALFKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgctatcgggcggcgctggtctggctgcgccgcgatctgcggctggacgac
cacgccgccttctaccacgcgctgaagcacagcgaggcggtcgcgccggtgttcgtgttc
gacgccgccatcctggacgcgctgccgcgcgatgaccgccgcgtcgatttcatccatcaa
agcgtcgcggccttgaaggcggagttgaacgcgctgggcggcgacctgctggtccgccag
ggcctgcctgtcgacgagattccacggctggcggcggcgctcggcgccgacgcggtgttc
tgcaaccgcgactacgagccggccgcccgcgagcgcgacgccgaggtggcgcggcggctg
tctgaaaacggcgttgccttccacgccgccaaggatcaggtgatcttcgataccgacgag
gtgctgaccggcgccggcaagccgttttcggtgttcacgccgtacaagaacgcctggttg
aaagcgctgacgccgttccatctgcaggcctacccggtgcggcgctatctgggtgcgctg
atgccgcgaacgccggaggcgatgccgtcgctggccgacatcggcttcgcagccagcgat
ctgtccagcctgcctgttcggcccggcgcggccggcgccgaggcgctgttcgccgatttc
gccgaccgcatcgagcgctacaaggcgcaacgcgactttcccggcgtcaagggcgtgtcc
tatctgagcgtccacctgcgcttcggcaccctttccatccgccagttggccgcctacgcc
tggcacgacggcggcgagggggcgatgacctggctgagcgagctgatctggcgcgatttc
taccagcaggtgctgtggcaccggcccgacgtggtggagcgcgcgttcaagccggaatac
gacgcgctgccgttccccaacgacgccgaatggttcgacgcctggcgcgacggccgcacc
ggctatccgctggtggacgcggcgatgcgccagctgaaccgcagcggctatatgcacaac
cggctaaggatggtggcggccagctttttggtgaaggacctgctgatagactggcgctgg
ggcgagcgctacttcgccgagaaactgctggatttcgacctggcggccaacaacggcggc
tggcagtgggcggccagcaccggttgcgacgcccagccgtacttccgcatcttcaatccg
gtcagccagagcgagaagttcgacccggacggccgcttcatccgtcgctatgtgccggag
ctggcgcggctgccggacaagctgatccacgcgccgtggctggccaggccggagcagctg
gcggacgccggcgtgcggctggggcgcgactacccgcagccgctggtcgaccacgcggtt
cagcgagagttggcgctggccctgttcaagcgctga
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