Chromobacterium sp. ATCC 53434: CXB49_05725
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Entry
CXB49_05725 CDS
T05234
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXB49_05725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_05725
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXB49_05725
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CXB49_05725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AUH50342
LinkDB
All DBs
Position
1197581..1199593
Genome browser
AA seq
670 aa
AA seq
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MLLTFSDSPFQLNQPFPPAGDQPAAIEQLVEGLSDGLSYQTLLGVTGSGKTYTMANVIAR
TGRPAIIMAHNKTLAAQLYSEMREFFPHNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKSILERPDCIIVATVSAIYGIGDPSDYHQMILHLKEGERTPQREMISR
LTTMQYSRNDLDFGRGTFRVRGDVIDIYPAESSDTALRVSLFDDEVETLTLFDPLTGTTK
QRVGRYTVFPSSHYVTPRDTVIRACEQIKDELRYRIEWYQKEGKLVEAQRIEQRTRFDLE
MLYEMGFCKGIENYSRHFSGRGPGDPPPTLIDYLPKNALMFIDESHVTVPQVGAMYKGDA
ARKANLVEYGFRLPSAADNRPLKFHEFEQLMPQTVFVSATPAVYEKEHAGQVVEQVVRPT
GLVDPLIEIRPVATQVDDLLSEIRDRMERGERVLVTTLTKRMAEQLADYYTEHGIKVRYL
HSDIDTVERVEIIRDLRLGMFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLNGKALLYADRITDSMKRAMDETERRRAKQMAFNAEHGITPRGVEKKVKDI
IDGVYSVEAERKKLVDQAKVAMMDEKSLAKEIKRLEKEMLEAARNLEFERAAGIRDELKQ
LKEQAWLGDL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcaccttttccgacagcccgtttcagctgaaccagcctttcccgccggccggc
gaccagccggccgccatcgaacaactggtggagggcctgtccgacggcctgtcctaccag
acgctgctgggcgtgaccggttccggcaagacctacacgatggccaacgtcatcgcccgg
accggcaggccggccatcatcatggcgcacaacaagacgctggccgcgcagctgtacagc
gagatgcgcgagtttttcccgcacaacgcggtcgagtacttcgtctcctactacgactac
tatcagccggaggcctacgttcccagccgcgatctgttcatcgagaaagattccagcatc
aacgaacatatcgagcagatgcggctgtcggcgaccaagtccatcctggagcggccggac
tgcatcatcgtggcgacggtgtcggcgatctacggtatcggcgatccgtccgactaccac
cagatgatcctgcatctgaaggagggcgagcgaacgccgcagcgcgagatgatcagccgg
ctgacgacgatgcagtacagccgcaacgacctggatttcggccgcggcactttccgcgtc
cgcggcgacgtgatcgacatctacccggcggaaagcagcgataccgccctgcgcgtcagc
ttgttcgacgacgaggtagaaacgctgacgctgttcgatccgttgaccggcaccaccaag
caacgcgtcggccgctacaccgtctttccgtccagtcattacgtgacgccgcgcgacacc
gtgatccgggcctgcgagcagatcaaggacgagctgcgctaccgcatcgagtggtatcag
aaggaaggcaagctggtggaggcgcagcgcatcgagcagcgcacccgcttcgacctggaa
atgctgtacgagatgggtttttgcaagggcatcgaaaactactcgcgccacttctccggc
cgcgggcccggcgatcccccgccgacgctgatcgactacctgccgaaaaacgcgctgatg
ttcatcgacgagagccacgtcaccgtgccgcaggtcggcgcgatgtacaagggcgacgcc
gcgcgcaaggccaatctggtcgagtacggcttccgcctgccgtcggccgccgacaaccgg
ccgctgaaattccacgaattcgagcaactgatgccgcagaccgtcttcgtctcggcgacg
ccggcggtgtacgagaaggagcacgcgggccaggtggtcgagcaggtggtgcggccgacc
ggcctggtcgatccgctgatcgagatccgtccggtggcgacccaggtggacgatctgctg
tccgagatccgcgaccggatggagcgcggcgagcgggtgctggtcaccacgctgaccaag
cggatggccgagcagctggccgactactacaccgagcacggcatcaaggtgcgctatctg
cacagcgacatcgacaccgtcgaacgggtggagatcatccgcgacctgcgcctcggcatg
ttcgacgtgctgataggcatcaacctgctgcgcgagggcctggacattccggaagtcagc
ctggtggcgatactggacgccgacaaggaaggcttcctgcgttccgagcgcagcctgatc
cagaccataggccgcgccgcgcgcaacctgaacggcaaggcgttgctgtacgccgaccgc
atcaccgattcgatgaagcgggcgatggacgagaccgagcgccgccgcgccaagcagatg
gcgttcaacgctgaacacggcattacccccaggggcgtcgagaagaaggtcaaggacatc
atagacggcgtctacagcgtggaggccgagcgcaagaagctggtggaccaggccaaggtg
gcgatgatggacgagaagtcgctggccaaggaaatcaagcggctggagaaggagatgctg
gaggcggcccgcaatctggagttcgagcgggcggccggcatacgcgacgagttgaagcaa
ttgaaggagcaagcctggctcggcgatttgtaa
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integrated database retrieval system
