Chromobacterium sp. ATCC 53434: CXB49_06555
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Entry
CXB49_06555 CDS
T05234
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro02020
Two-component system
chro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CXB49_06555
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CXB49_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chro03021
]
CXB49_06555
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
chro02035
]
CXB49_06555
Transcription machinery [BR:
chro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXB49_06555
Bacterial motility proteins [BR:
chro02035
]
Flagellar system
Flagellar assembly proteins
Stator
CXB49_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
CTD3
UPF0122
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
AUH50492
LinkDB
All DBs
Position
1366739..1367434
Genome browser
AA seq
231 aa
AA seq
DB search
MYAESYALPSRAADEGRHLATYAPLVKRAARQLASQAGGVFDREDMEQIGLMALLDCLRR
YGGEPDERFAGFAMLRIRGAILDELRRLDWRPRAVRQEAHRVRDGLRELRRKLRREPSEA
EAMSLLGLDADGYREALLAENAEAMASFDELVASGMEMAAEGSPEARLERQSELARALTA
LNEREQQVIQMYYEFELSLKEIAAVLDLTEARICQINKSALKKMQACLTAA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgagagctacgcgctgccgtcccgcgcggccgacgagggccggcacctggcg
acctacgcgccgctggtcaagcgcgcggcgcgccagctggccagtcaggccggcggcgtg
ttcgaccgcgaggacatggagcagatcggcctgatggccttgctggactgcctgcgccgc
tacggcggcgagccggacgagcgtttcgccggcttcgcgatgctgcgcatccgcggcgcc
attctcgacgagttgcggcggctggactggcggccgcgcgcagtgaggcaggaggcgcac
cgggtgcgcgacgggctgcgcgagttgaggcgcaagctcaggcgcgagccgagcgaggcc
gaggcgatgtccttgctggggctggacgccgatggctatcgcgaggcgctgctggccgag
aacgccgaggcgatggccagcttcgacgaactggtggcctccggcatggagatggccgcc
gagggttcgccggaggcgcgcctggagcggcagagcgagttggcgcgcgcgctgaccgcg
ctgaacgagcgcgagcagcaagtcatccagatgtattacgaattcgaactgagtctcaag
gagatcgcggcggtgctggacctgaccgaggcccgaatctgccagatcaacaagagcgcc
ctgaaaaagatgcaggcctgcctgacggcggcttga
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