Chromobacterium sp. ATCC 53434: CXB49_07255
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Entry
CXB49_07255 CDS
T05234
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chro03009
]
CXB49_07255
Enzymes [BR:
chro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CXB49_07255
Ribosome biogenesis [BR:
chro03009
]
Prokaryotic type
rRNA helicases
CXB49_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Radical_SAM
FMN_dh
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AUH50616
UniProt:
A0A2H5DU81
LinkDB
All DBs
Position
complement(1521008..1522390)
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AA seq
460 aa
AA seq
DB search
MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGL
GLLASLNPRWFGVQALVMCPTRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSL
EHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMIDMGFIEEIVGIVRACPKNRQ
TLLFSATYPEDIRKASGQFLKNPVEVKVESLHTADHIEQWFYKVKPETRLETVTRILRHL
RPTSALAFCNTRERCKELVRELQEQGFNALTLHGDLEQRERDQILLRFANKSATVLVATD
VAARGLDIKELDLVINVDVTHDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENY
QQADLTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRPGDLLGALTGEAGFVGSQIGK
INIFEFASFVALDRAIAEQALAKLSQGKIKGKQFKMRLIG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagccgctttttccaccctgcccctgcccgccccgctgctgtccaacctggac
agcctgggctaccaccagatgaccgccatccaggccgccagcctgcccgccattctggaa
ggccgcgacctgatcgcccaggccaagaccggcagcggcaagacggctgcgttcggactg
ggcctgttggccagcctcaacccgcgctggttcggcgtgcaggcgctggtgatgtgcccg
acgcgcgagctggccgaccaggtggcgcaggaaatccgccgcctggcgcgcgccatcgac
aatatcaaggtggtgacgctgaccggcggcacgccgatgggtccgcagatcggctcgctg
gagcacggcgcccacatcgtcgtcggcacgccgggccggctgcaagaccacctgttccgc
gagacgctgaacctgaccggcgtgaagacgctggtgctggacgaggcggaccggatgata
gacatgggcttcatcgaggagatcgtcggcatcgtccgcgcctgcccgaaaaaccgccag
acgctgctgttctccgccacctatccggaagacatccgcaaggccagcgggcagttcctg
aaaaacccggtcgaagtgaaggtggagtcgctgcacaccgccgaccacatcgagcagtgg
ttctacaaggtgaagccggaaaccaggctggagacggtcacccgcatcctgcgccacctg
cgccccacctcggcgctggccttctgcaacacccgcgagcgctgcaaggaactggtgcgc
gaattgcaggaacagggcttcaacgcgctgacgctgcacggcgatctggaacagcgcgag
cgcgaccagatcctgctgcgcttcgccaacaagagcgccaccgtgctggtggccaccgac
gtggcggcgcgcggcctggacatcaaggaactggatctggtgatcaatgtcgacgtcacc
cacgatccggaggtgcacatccaccgcatcggccgcaccggccgcggcgagcagcacggc
ctggcgctgacgctggccaccgacagcgaggccaagcgcctggtgcagatcgaaaactac
cagcaggcggacctgacctgggccgacgtggaagaactgactccggcgccgggcggcccg
ctgctgccgccgatggtgacgttggagatcgccggcggcaagcgcgagaagctgcgcccg
ggcgacctgctgggcgcgctgaccggcgaagccggcttcgtcggcagccagatcggcaag
atcaacatcttcgaattcgccagcttcgtcgcgctggaccgcgccatcgccgaacaagcg
ctggccaagctgtcccagggcaagatcaagggcaagcagttcaagatgcgcttgatcggc
tga
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