Chromobacterium sp. ATCC 53434: CXB49_10870
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Entry
CXB49_10870 CDS
T05234
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_10870
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CXB49_10870
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AUH51278
UniProt:
A0A2H5DW51
LinkDB
All DBs
Position
complement(2374127..2374546)
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AA seq
139 aa
AA seq
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MDKLTREQRSAVMSRIKAGDTTPELRVRHALHSMGYRFRLHRKDLPGKPDIVLPRHRLCL
FVHGCFWHQHQGCKRSNVPESNREFWIEKFEKNRMRDESNVIALEEAGWRVCVIWECQTK
DADALDTIIRECLSVEANK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggataaattaacgcgcgaacaacgttcggcagtaatgtctcggataaaggccggcgac
acaactcctgaattacgtgttaggcatgctttgcactctatggggtaccgtttccgcctg
catcgaaaggatttgccaggaaaaccggatattgttctccccaggcatcgtctctgcttg
ttcgtccatgggtgtttttggcatcagcatcaaggctgtaagcgctcaaatgtccctgaa
agtaatagggagttttggatagagaagttcgaaaaaaatcgtatgcgagacgaaagcaat
gtgattgcacttgaggaagcagggtggcgagtatgcgtaatatgggagtgtcaaacgaaa
gatgcggatgcattagacacgataattagggagtgtctctccgttgaggccaataaataa
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