Chromobacterium sp. ATCC 53434: CXB49_12240
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Entry
CXB49_12240 CDS
T05234
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CXB49_12240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chro03019
]
CXB49_12240
03009 Ribosome biogenesis [BR:
chro03009
]
CXB49_12240
03036 Chromosome and associated proteins [BR:
chro03036
]
CXB49_12240
Enzymes [BR:
chro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CXB49_12240
Messenger RNA biogenesis [BR:
chro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CXB49_12240
Ribosome biogenesis [BR:
chro03009
]
Eukaryotic type
90S particles
RNase
CXB49_12240
Prokaryotic type
rRNA processing factors
CXB49_12240
Chromosome and associated proteins [BR:
chro03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CXB49_12240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AUH51533
LinkDB
All DBs
Position
complement(2706533..2707243)
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AA seq
236 aa
AA seq
DB search
MTQIDNRFRRLSQALDYAFQKPELLRQALTHRSHSSANNERFEFVGDSILNYTVARMLFD
RFPQLTEGELSRLRANLVNQNTLAEIAHELTLGDYLYLGEGELKSGGFNRPSILADALEA
TFAAVSFDADFAAAEQVVRKLYAQRVATIDTTRQAKDAKTRLQEALQARKLALPRYRILS
QSGEAHEQWFKVECDLGEMALIATGDGGSRRAAEQQAAEAAIVLLEQKLAAIKKKS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaaatcgacaaccgattccggcgcctgtcccaggcgctggattatgcatttcag
aaaccggaattgctgcgccaggcgctgacgcaccgcagccatagcagcgccaacaacgag
cgcttcgaattcgtcggcgacagcatcctcaattacaccgtggcgcggatgctgttcgac
cgcttcccgcaactgaccgagggcgagctgtcgcgcttgcgcgccaatctggtcaaccag
aacacgctggccgagatcgcccacgagctgacgctgggcgactatctgtatctgggcgag
ggcgagctgaagagcggcggcttcaaccggccgtccattctggccgacgcgctggaggcg
acgttcgccgccgtcagtttcgacgccgacttcgccgccgccgagcaggtggtgcgcaag
ctgtacgcccagcgcgtggccacgatagacaccacccgccaggccaaggacgccaaaacc
cgcctgcaggaggcgctgcaggcgcgcaagctggcgctgccgaggtatcgcatcctgtcg
cagagcggcgaagcccacgaacagtggttcaaggtggagtgcgatctgggcgagatggcc
ctgatcgccaccggcgacggcggcagccgtcgcgccgccgaacagcaggccgccgaagcg
gccatcgtcctgctggaacagaaactcgcagcaatcaagaaaaaatcatga
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