Chromobacterium sp. ATCC 53434: CXB49_15450
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Entry
CXB49_15450 CDS
T05234
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chro03009
]
CXB49_15450
Enzymes [BR:
chro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CXB49_15450
Ribosome biogenesis [BR:
chro03009
]
Prokaryotic type
ribosomal protein modification factors
CXB49_15450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AUH52114
UniProt:
A0A2H5DYK3
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All DBs
Position
complement(3505579..3506895)
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AA seq
438 aa
AA seq
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MNKTPRVGFVSLGCPKAASDSEQILTRLRAEGYDIAASYDGVDLVVVNTCGFIDSAVTES
LDAIGEALNENGKVIVTGCLGAKGDVVREVHPSVLAVTGPHAADEVMSAVHTHLPKPHDP
FVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAKA
GVKEILVISQDTSAYGVDTKYKLGFHNGRPVKTRMTELCEELGSHGIWVRLHYVYPYPHV
DEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPELVIRSTF
IVGFPGETEEDFEELLTFIREAELDRVGCFTYSPVDGATANELPNPVPEDVKEARKERFM
EVQAEISARRLERRIGQTLQVLVDEIDDEGTAVCRSYADAPEIDGLVFVEDAAGMKAGEF
YQVEIVDCSEHDLWGVRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaccccccgcgtcggtttcgtctcgctgggctgccccaaggccgccagcgat
tccgaacagatccttacccgccttcgcgccgaaggctacgatatcgccgcctcctatgac
ggagtggacctggtagtggtgaacacctgcggcttcatcgattccgcagtcaccgagtcg
ctggacgccatcggcgaggcgctgaatgaaaacggcaaagtgattgtgaccggctgtctg
ggggccaagggcgatgtggtgagggaagtccacccgtcggtcttggccgtgaccggtccg
catgccgccgacgaagtgatgagcgcggtgcacacccacctgccgaagccgcacgatccc
ttcgtcgacctggtgccggacatcggcgtgcgcctgacgccgaagcactacgcctatctg
aagatttccgagggctgcaaccaccgctgcaccttctgcatcattccgtcgatgcgcggc
gatctggagagccgacccatccacgacgtgctgcgcgaggccgagagcctggccaaggcc
ggcgtcaaggaaatcctggtgatttcgcaggacacctcggcttacggcgtggataccaag
tacaagctgggcttccacaacggccgtccggtcaagacccggatgaccgagctgtgcgag
gagctgggtagccacggcatctgggtgcgcctgcactacgtctacccgtacccgcatgtg
gacgaggtgattccgctgatgcgcgacggcaagatcctgccctatctggacatcccgttc
cagcatgccagccagaaggtgctgaagctgatgaagcggccggccaacagcgacaatgtg
ctggcgcgcatcaagaagtggcgcgagatttgcccggagctggtgattcgctccaccttc
atcgtcggtttccccggcgagaccgaggaggatttcgaggagctgctgaccttcatccgc
gaagctgaactggaccgcgtgggctgtttcacctattccccggtcgacggcgccaccgcc
aacgagctgccgaatccggtgccggaggacgtgaaggaggcgcgcaaggagcgcttcatg
gaagtgcaggccgagatcagcgcgcgccgtctggaacgtcgcatcggccagaccctgcag
gtgctggtggacgagatcgacgacgagggcaccgcggtttgccgcagctacgccgacgcg
ccggagatcgacggcctggtgttcgtcgaggacgcggccggcatgaaggcgggcgagttt
taccaggtggaaatcgtcgattgcagcgaacacgacctgtggggcgtgcgcaagtaa
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