Chromobacterium sp. ATCC 53434: CXB49_16010
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Entry
CXB49_16010 CDS
T05234
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03030
DNA replication
chro03430
Mismatch repair
chro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXB49_16010
03430 Mismatch repair
CXB49_16010
03440 Homologous recombination
CXB49_16010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chro03032
]
CXB49_16010
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_16010
Enzymes [BR:
chro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CXB49_16010
DNA replication proteins [BR:
chro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CXB49_16010
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CXB49_16010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUH52209
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All DBs
Position
complement(3618499..3619212)
Genome browser
AA seq
237 aa
AA seq
DB search
MIILDTETTGLDPQQGHRIIEFAGLEMIGRKLTGKHLHCYIHPERDIDPDAQRVHGISLE
FLAGKPVYRQVAQEIADFLRGAELIIHNAPFDVGFLNAEFAKLGMEPIGKLCSGVIDTLR
DARDMFPGKRNSLDALCDRFEIDRSNRTLHGALVDCELLSEVYLWMTRGQESLAMDIEVE
LPGGDAGAIQFERKPLTVLAASADELAEHQAYLDALDKAVKGQCLWRGLEAPAAAEG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatcattctcgataccgaaaccaccggtctcgatccgcagcagggccaccgcatcatc
gaattcgccggcctggaaatgataggccgcaagctgaccggcaagcatttgcactgttac
atccatcccgaacgcgacatcgacccggacgcgcagcgggtgcacggcatttcgctggag
tttctcgccggcaagccggtgtaccgccaggtggcgcaggagatcgccgacttcctgcgc
ggcgccgagctgatcatccacaacgcgccgttcgacgtgggcttcctcaacgccgaattc
gccaagctgggcatggagccgatcggcaaactgtgcagcggcgtgatcgacacgctgcgc
gacgcgcgcgacatgttcccgggcaagcgcaacagcctggacgcgctgtgcgaccgcttc
gagatcgaccgttccaaccgtaccctgcacggcgcgctggtggactgcgaactgctgtcc
gaagtgtatctgtggatgacgcgcgggcaggaaagcctggcgatggacatcgaggtggag
ttgccgggcggcgacgccggcgccatccagttcgagcgcaagccgctgacggtgctggcc
gccagcgccgacgagctggccgagcatcaggcctatctggacgcgctggacaaggcggtg
aaggggcagtgcctgtggcgcggcctggaggcgccggcagcggcggagggctga
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