Chromobacterium sp. ATCC 53434: CXB49_16545
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Entry
CXB49_16545 CDS
T05234
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CXB49_16545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_16545
Enzymes [BR:
chro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXB49_16545
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CXB49_16545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
HypA
Zn_ribbon_6
AAA_16
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AUH52305
UniProt:
A0A2H5DZ38
LinkDB
All DBs
Position
complement(3762824..3765013)
Genome browser
AA seq
729 aa
AA seq
DB search
MSIDGSGPVQVAVDVPLAGTFSYLTESSVMIGARVCVPFGNRRLCGVVVTPIPGEGVGAP
DASRLRCIESVLDGLPPLPGEFLELARFAAAYYHHPLGQTLFTALPTALREPRDVRRPDR
RPFALTAAGLGDPPPPRQRARLALWQAMQDGPLTSEQARAVTPQAGKLLADWLAEGKAER
ATPEPAPLQLGEGPALNDEQQAALDALRAGSGFQPWLLHGVTGSGKTEVYLRLIAEQLTA
RRQTLVLVPEINLTPQLIDRFAKRFPSSRIVVQHSHLADGERMHGWLDAWHGDADVVIGT
RLSVFTPLPRLGLIVVDEEHDGSFKQQDGLRYHARDLAVWRARRAGVAIVLGSATPSLET
VANVEAGRYKKLALTRRAHGAARLPDVRLVDTRRQKLAEGLAEPVLEALKQRLARQEMSL
VFINRRGFAPVVACTACGWMSGCPHCSAKLVVHLMERKLRCHHCGWEEPVPRACPDCGDP
DIKPLGEGTQRLESALQRMLPEARVLRIDRDTTSRKDAWDEVYRKVHAGEVDILVGTQML
AKGHDFGTLSLVAALGADGGLYSADFRASERLFAQLMQVAGRAGRADAPGEVLVQTQWPD
HPLYQALVAHDFDGYAAALLTERGQAGFPPTTFQALLRADSPELAQATAFLRQAREALEP
LAEGVLISGPAPALMARLAQRERAQLVLEASQRAALHRLLDALPALLDPLARAHGRSLRW
SLDVDPQEL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgatgggtccgggccggtccaggtggcggtcgatgtgccgctggccggaacg
ttcagttacctgactgaatcgtctgtcatgataggcgcgcgcgtctgcgtgcctttcggc
aatcgccgcctgtgtggcgtagttgtcacgccgataccgggggagggtgtgggcgcgccg
gacgcctcccgcctgaggtgcatagaaagcgtgctcgacggcctgccgccgttgccgggc
gaattcctcgaactcgcgcgcttcgccgccgcctactaccaccatccgctgggccagacc
ttgttcaccgccttgccgaccgcgctgcgcgagccgcgcgacgtgcgccggcccgaccgc
cggccattcgcgttgaccgccgccggtcttggcgatccgccgccgccgcggcagcgcgcg
cggctggcgctgtggcaggcgatgcaggacggcccgctgacgtcggagcaggcccgggcg
gtgacgccgcaggccggcaagctgctggccgactggctggccgagggcaaggccgagcgc
gcgacgccggagccggcgccgctacaactgggcgaggggccggcgctgaacgacgagcag
caggcggcgctggacgcgctgcgggccggctcgggcttccagccctggctgctgcacggg
gtcaccggcagcggcaagaccgaggtctatctgcgcctgatcgccgagcaactgacggcg
cgccgccagacgctggtgctggtgccggaaatcaatctgacgccgcagctgatagaccgc
ttcgccaagcgctttcccagcagccgcatcgtcgtgcagcacagccatctggccgacggc
gaacggatgcacggctggctggacgcctggcatggcgacgccgacgtggtgataggcacc
cggctatcggtgttcacgccgctgccgcggctggggctgatcgtcgtcgacgaggagcac
gacggctcgttcaagcagcaggacggtctgcgctaccacgcgcgcgacctggcggtatgg
cgcgcgcgtcgcgccggcgtcgccatcgtgctcggttcggcgacgcccagcctggagacg
gtggccaatgtcgaggccggccgctacaagaagctggcattgacccggcgcgcccatggc
gcggccaggctgcccgacgtcaggctggtcgacacccgccggcagaaactggccgaaggc
ctggccgagccggtgctggaggcgctgaagcagaggctggcgcgccaggaaatgagtctg
gtcttcatcaaccgccgcggcttcgcgccggtggtcgcctgcaccgcctgcggctggatg
agcggctgcccgcattgctcggccaagctggtggtgcacctgatggagcgcaagctgcgc
tgccaccactgcggctgggaggagccggtgccgcgcgcctgcccggattgcggcgacccg
gacatcaagcccttgggcgagggcacgcagcggctggagtcggcgctgcaacggatgttg
ccggaggccagggtgctgcggatagaccgcgacaccaccagccgcaaggacgcctgggac
gaggtttatcgcaaggtgcacgccggcgaggtggacatcctggtcggcacccagatgctg
gccaagggccacgatttcggcacgctgtcgctggtggcggcgctgggcgccgatggcggc
ctgtactcggccgactttcgcgcgtcggaacgcttgttcgcccagctgatgcaggtggcc
ggccgcgccggccgggccgacgcgccgggcgaggtgctggtgcagacgcaatggccggat
catccgctgtaccaggcgctggtcgcccacgatttcgacggctacgcggccgcgctgctg
accgagcgaggccaggctggtttcccgcccaccaccttccaggcgctgctgcgcgccgac
agccccgaactggcccaggccaccgcctttctgcgtcaggcgcgcgaggcgctggagccg
ctggccgagggcgtgctgatttccgggccggcgccggccttgatggccaggctggcccag
cgcgagcgcgcgcagctggtattggaggcctcgcagcgcgccgcgctgcaccggctgctg
gacgcgctgccggcgctgctcgatccgctggcgcgcgcgcacggccgcagcctgcgctgg
tcgctggatgtcgatccccaggaattgtga
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