Chromobacterium sp. ATCC 53434: CXB49_17095
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Entry
CXB49_17095 CDS
T05234
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03030
DNA replication
chro03430
Mismatch repair
chro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXB49_17095
03430 Mismatch repair
CXB49_17095
03440 Homologous recombination
CXB49_17095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chro03032
]
CXB49_17095
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_17095
Enzymes [BR:
chro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CXB49_17095
DNA replication proteins [BR:
chro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CXB49_17095
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CXB49_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AUH53676
LinkDB
All DBs
Position
complement(3888564..3889961)
Genome browser
AA seq
465 aa
AA seq
DB search
MFAQPCAIVDLETTGGNISRDRITEVGLVLIDGDRVERLSWLVNPGQPIPPFIENMTGIS
NEMVAAAPPFSALAAELLARLQGRLLLAHNARFDYGFLKNEFRRYGLRFQARTLCTVKLS
RRLYPQHFKHSLDSLIERHGIEMPERHRALADAEAVHRFLEVAGAELGQDRIAHEAAQLL
AQPAELSSLPADLQQQIEDMPDSAGVYALFGVDGGALYVGRAPNLYRKALAHFAERKPGQ
KSHEARIDEAVARLEWRESLGEFGAHLLELQWLRRLQPLHNPRARMMGEVCTLQLSPGDD
GFVRPLSVAAQTIDFSRTADLYGLFRHAREARKALAQIALAQGLCQAVLGVEQVTSRKGA
PCAAYRIGRCRGACVGDEGADSHNRRLQTALQRLRVKPWPFEGAVAVAERDEVCGDVVEH
LFDRWCYLGSRRNGGELEGEPAFDLDYYKLLESELRKPGRALRPL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ctgtttgcacagccctgcgccatcgtcgacctggaaaccaccggcggcaacatcagccgc
gaccgcatcaccgaagtcggcctggtgctgatagacggggaccgggtcgaacgcctgtcc
tggctggtcaatcccggccagccgataccgccgttcatcgagaacatgaccggcatcagc
aacgagatggtggcggccgcgccgccgttctcggcactggccgccgagctgctggcgcgt
ttgcagggccggctgctgctggcgcacaacgcccgtttcgactacggcttcctgaaaaac
gaattccgtcgctacggcctgcgcttccaggcgcgcacgctgtgcaccgtcaagctgtcg
cgccggctgtatccgcagcatttcaagcacagcctggacagcctgatcgagcggcatggc
atcgagatgccggagcgtcatcgggcgctggccgacgccgaggccgtgcatcgcttcctg
gaggtcgccggcgccgagctggggcaggatcggatcgcgcacgaggcggcccagctgctg
gcccagccggccgagctgtccagcctgccggccgatttgcagcagcagatcgaggacatg
ccggactccgccggcgtctacgccttgttcggcgtcgacggcggcgcgctctatgtcggc
cgcgcgcccaatctgtaccgcaaggcgctggcccacttcgccgagcgcaagccgggacag
aagagccacgaggcgcggatagacgaggcggtggcgcggctggaatggcgcgagagcctt
ggcgagttcggcgcccatctgctggagctgcagtggctgcgccgcctgcaaccgctgcac
aatccgcgcgcgcgcatgatgggcgaggtgtgcacgctgcaattgtcgccgggcgacgac
ggcttcgtgcggccgctgtcggtggcggcgcagaccatagacttcagccgcaccgccgat
ctgtacggcctgttccgccacgcgcgcgaggcgcgcaaggccctggcccagatcgcgctg
gcccagggcctgtgtcaggcggtgctcggcgtcgagcaggtcaccagccgcaagggcgcg
ccgtgcgccgcctaccgcatcggccgctgccgcggcgcctgcgtcggcgacgagggcgcc
gacagccacaaccgccgtctgcaaacggcgctgcagcggctcagggtcaagccgtggccg
ttcgagggcgcggtggcggtggcggagcgtgacgaggtgtgcggcgacgtggtcgagcac
ctgttcgaccgctggtgctatctgggtagccgccgcaacggcggcgagctggagggcgag
ccggccttcgatctcgactactacaagctgctggagagcgagttgcgcaagccgggcagg
gcgttgcggccattgtga
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