Chromobacterium sp. ATCC 53434: CXB49_18190
Help
Entry
CXB49_18190 CDS
T05234
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXB49_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_18190
Enzymes [BR:
chro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CXB49_18190
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CXB49_18190
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CXB49_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TPP_enzyme_C
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AUH52589
UniProt:
A0A2H5DZX1
LinkDB
All DBs
Position
4124425..4125240
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGVEPHIAGRVLRGAVVRNPSLRWPVPPDLAERVAGEKVLSVRRRAKYL
LLECESGTLLIHLGMSGSLRVMPAGSPPQKHDHLDLLLDDKLLRYRDPRRFGAVLWHIGP
IEHHPLLRALGPEPLSFAFDGAALHDAVRRRGSPIKLVIMDNHVVVGVGNIYANESLFHA
GIAPTRSASALSRGDCDRLAAEIKAVLARAIDAGGSTLRDFVDSEGKPGYFQQSYMVYNR
QEEPCRQCGTPIRHIRQGQRSTYYCPLCQPC
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagtcgaaaccacccgccgcggcgtcgagccgcatatcgccggc
cgcgtcctgcgcggcgccgtggtgcgcaaccccagtctgcgctggccggtgccgccggac
ctcgccgagcgcgtcgccggcgaaaaggtgctgtcggtgcgccgccgcgccaaatacctg
ctgctggagtgcgagagcggcaccttgctgatccacctcggcatgtcgggcagcctgcgg
gtgatgccggccggctcgccgccgcagaagcacgaccatctggacctgctgctcgacgat
aagctgctgcgctaccgcgatccgcgccgcttcggcgccgtgctgtggcacatcggcccg
atcgagcatcacccgctgttgcgggcgctggggccggaaccgttgtccttcgccttcgac
ggcgccgcgctgcacgacgccgtccgtcgccgcggcagcccgatcaagctggtcatcatg
gacaaccatgtggtggtcggcgtcggcaacatctacgccaacgaatcgctgttccacgcc
ggcatcgcgccgacccgctccgcctcggcgctgtcccgcggcgactgcgaccggctggcc
gccgaaatcaaggccgtgcttgcgcgcgcgatagacgccggcggcagcacgctgcgcgat
ttcgtcgacagcgagggcaagcccggctacttccagcaaagctatatggtgtacaaccgc
caggaggagccgtgccgacaatgcggcacgccgatccggcacatccgacagggtcagcgc
agcacttactattgcccgctgtgccagccatgttag
DBGET
integrated database retrieval system
