Chromobacterium sp. ATCC 53434: CXB49_18270
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Entry
CXB49_18270 CDS
T05234
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CXB49_18270 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_18270 (recC)
Enzymes [BR:
chro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CXB49_18270 (recC)
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CXB49_18270 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUH53689
UniProt:
A0A2H5E310
LinkDB
All DBs
Position
complement(4145433..4148630)
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AA seq
1065 aa
AA seq
DB search
MLFLYQSNRLEQLGELFCGMTRAMPLADPFAAETVIVQSRGMGRWITLDVAREAGVAANI
DFALPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLPTLEGEPFEPVIHYLEGGEAA
AFELAGKIADIFDQYLVFRPDWIRAWEAGELSGLGDDEAWQAALWRRLAESDPGRHRVRM
LDQFFADLKPEHLPPRVTLFGIASLAPMYLALVKRLAELTDVCLFTLNPCEAYWGDIVDA
RRKLKLRQAGDLFASEGHPLLASLGKQGRDFFELIAEDAELDARPLFTAPGGDSLLARLQ
RDILQLNDPSQLPRAFDPADDSVEVHACHGPMRELEALKDRLLAMFAADPKLSPADVAVL
TPDINGYAPYIDAVFGRRDDAPNIPYSIADRRVEREQPLLASYAAVLQLADSRFAADEVL
ALLDCPALLARFDLADADLAFVQDWVRVAGIRWGRSAAHKASLGLPAEAAYTWRWGLDRL
LLGTVLPPALAGDDAGLFAGLLPHTAAQGQLGETLARFAVFYDALDALADEWARPASPQD
WARRFHQAGERLFLADGDDEAALELLREAFAELAEDAELAGFDRPVGLAVARDWLLRKLS
LSSAQGFLSGGVTFCAMVPMRSIPFRTLCLVGMNDGAYPRDERPVSFDLVARNPRRGDRS
RRFDDRYLFLEAILSARGWLYLSYVGQSARSGETLPPSPLVSELLDTLSAMCGEDMAARL
TLRHPLQPFSPSAFDGGDARLASFEPVFAAALAAPPAEPAPFVAPLPDEAAATVVNLHDF
IRFWQNPARAWLADRLALRVAYGGDAQPAREPFAMERDASQALRRQLVEAMLHRRPSAPA
RERVAAAGLLPCGELGQAWLQEEGRASVRLAGRLPRALGEEALPPQPVHLDIAGFTVVGE
LYGLRPEGRLDFIVGKMNAAQRVALWLGHLILCAARPAGVVPHSACYDDAGSTLLYDEID
AAGLLTPWLVRWRQGQAQPLPFFGRTSWAYAEALAKNPDKQDKALAAAWQKWEPNFILGD
GVAQKDEPAIALAFRHQSPLDDPLFGQLAETLLLPLAERLQGGEE
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttctctaccaatccaaccgtctcgagcaactgggcgagctgttctgcggcatg
acgcgggcgatgccgctggccgatccgttcgcggcggagaccgtgatcgtgcagagccgg
ggcatggggcgctggatcacgctggacgtcgcgcgcgaggccggcgtggccgccaacatc
gatttcgcgctgccggccgccttcgcctggcggttgatgcagaaggtgatgccggatctg
ccgcgcaagtcggccttcgtgcccgaggtgctggcctggcggctgctggccctgctgccc
acgctggagggcgaaccgttcgagccggtgatccattacctggagggcggagaggccgcg
gctttcgagctggccggcaagatcgccgacatcttcgaccagtacctggtgttccgcccg
gactggatacgcgcctgggaggccggcgagctgtcgggcctgggcgacgacgaggcctgg
caggcggcattgtggcggcggctggccgaaagcgatccgggccgccaccgcgtgcgcatg
ctggatcagttcttcgcggacctgaagccggaacatctgccgccgcgggtgaccttattc
ggcatcgcgtcgctggcgccgatgtatctggcgctggtcaagcggctggccgagctgacc
gacgtctgcctgttcacgctgaacccctgcgaggcgtactggggcgacattgtcgacgcg
cgccgcaagttgaagctcaggcaggccggcgatctgttcgccagcgagggccatccgttg
ctggcgtcgttgggcaagcaggggcgcgacttcttcgagctgatcgccgaggacgccgaa
ctggacgccagaccgctgttcacggcgcctggcggcgacagcctgctcgcccgactgcag
cgggacatcctgcagctcaacgatccgtcgcagctgccgcgcgccttcgatccggcggac
gactcggtcgaggtgcacgcctgccatggcccgatgcgcgagctggaggcgctgaaggac
aggctgctggcgatgttcgccgccgatcccaagctcagtccggccgacgtggcggtgctg
acaccggacatcaacggctacgcgccgtatatcgacgcggtgttcggccgccgcgacgac
gcgcccaatatcccgtacagcatcgccgaccggcgcgtcgagcgcgagcagccgctgctg
gccagctacgccgccgtcttgcagctggccgattcccgcttcgccgccgacgaggtgctg
gcgctgctcgactgcccggcgctgctggcgcgtttcgatctggcggacgccgatctggcc
ttcgtccaggactgggtgcgcgtcgccggcatccgctgggggcggagcgcggcgcacaag
gcgtcgctgggcctgccggccgaggccgcctacacctggcgctgggggctggatcggctg
ctgttgggcaccgtgctgccgccggccctggccggggacgacgccggcctgttcgccggc
ctgctgccgcacaccgccgcccaggggcagctgggcgagacgctggcgcgtttcgccgtt
ttctacgacgcgctggacgcgctggccgacgagtgggcgcggccggcgtcgccgcaggac
tgggcgcggcgcttccatcaggccggcgagcggctgttcctggccgacggcgacgacgag
gcggcgctggagttgctgcgcgaggccttcgccgagttggccgaggatgccgaactggcc
ggtttcgaccggccggttggcctggccgtggcgcgggactggctgctgcgcaagctgtcg
ctgtcgtcggcccagggcttcctgtccggcggcgtgaccttctgcgcgatggtgccgatg
cgctcgataccattccgcacgctgtgcctggtcgggatgaacgacggcgcctatccgcgc
gacgagcggccggtcagctttgacctggtggcgcgcaacccgcgccgcggcgaccgttcg
cgccgtttcgacgaccgctatctattcctggaggccatcctgtcggcgcgtgggtggctg
tatctgtcttatgtcggccagtcggcgcgcagtggcgagacgctgccgccgtcgccgctg
gtgtcggagctgctggacacgctgtcggcgatgtgcggcgaggacatggcggcgcgattg
acgctgcgtcatccgctgcagccgttctcgcccagcgccttcgatggcggcgacgcgagg
ctggccagcttcgagccggtcttcgccgccgcgctggccgcgccgccggccgagccggcg
ccgttcgtcgcgccgctgccggacgaggcggcggcgacggtggtcaatctgcacgatttc
atccgcttctggcagaacccggcgcgggcctggctggccgaccggctggcgttgcgcgtc
gcctatggcggggacgcgcagccggcgcgcgagccgttcgcgatggagcgcgacgccagc
caggcgctgcgccgccagctggtggaggcgatgctgcaccgcaggccgtcggcgccggcg
cgggagcgggtggccgccgccggcctgctgccctgcggcgaactgggccaggcctggctg
caagaggagggtcgggccagcgtccggctggccggccggctgccgcgcgcgctaggcgag
gaggcgctgccgccgcagccggtgcatctggacatcgccggcttcaccgtggtcggcgag
ctgtacggtctgcggcccgagggccggctggacttcatcgtcggcaagatgaacgccgcc
cagcgcgtcgcgctgtggctgggccatctgatcctgtgcgcggcgaggccggccggcgtc
gttccgcacagcgcctgctacgacgacgccggcagcacgctgctttacgacgagatcgac
gccgccggcctgctgacgccgtggctggtccgctggcgccagggccaggcccagcccttg
ccgttcttcggccgtaccagctgggcctacgccgaggcgctggccaagaatccggacaag
caggacaaggcgctggccgccgcctggcagaagtgggagcccaatttcattctcggcgac
ggcgtcgcgcagaaggacgagccggcgatcgcgctggccttccgccatcagtcgccgctg
gacgatccgctgttcggccagttggcggagacactgctgctgccgttggccgaacggctg
cagggaggcgaggaatga
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