Chromobacterium sp. ATCC 53434: CXB49_18650
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Entry
CXB49_18650 CDS
T05234
Name
(GenBank) pseudouridylate synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chro03009
]
CXB49_18650
Enzymes [BR:
chro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CXB49_18650
Ribosome biogenesis [BR:
chro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CXB49_18650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
S4_2
DUF3203
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AUH52665
LinkDB
All DBs
Position
4223585..4224421
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AA seq
278 aa
AA seq
DB search
MDDTNVRLSKRMVELGLCSRREADACIEQGLVKVDGKVVNTLGARVRPEQQITLAGQAQA
LATLPVTMLLNRAEGEDTPPAQLLGPDSRSPQDGAEQLWLARHRQHLIAAGAVDERCHGL
LVLTQDKKLPRHLAECEMEFLLQVDRAPAADELKARVAAIRLDGKPLRQCKISRQSDHQL
RCAVYAPRSGFFAEISRQLGIKLQSARCIRIGRLALAGLQPGQWRYLQPFERFRFLPAPA
PRGLPAFAFPFDGDAHCPAAAGARYRTDQGARNRLMPE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggatgatacgaacgtgcgcctgtccaagcgcatggtggagctggggctgtgctcgcgg
cgcgaggccgatgcctgcatcgagcagggcctggtgaaggtggacggcaaagtggtcaac
acgctgggcgcgcgggtccgccctgagcagcaaatcaccctggccggccaagctcaggcc
ttggcgacgctgccggtgaccatgctgctgaaccgcgcggaaggcgaagacaccccgccg
gcgcagctgctggggccggacagccgctcgccgcaggacggcgcggaacagctatggctg
gcgcgccaccgccagcatctgatcgccgccggcgccgtcgatgagcgctgccacggcctg
ctggtgctgacccaggataaaaaactgccgcgccatctggccgagtgcgaaatggaattc
ctgctgcaagtggatcgcgcgccggcagccgacgagctgaaagcccgcgtcgccgcgatc
cgcctcgacggcaagccgctgcgccagtgcaagatcagccgccagagcgaccatcagttg
cgctgcgcggtgtacgcgccgcgcagcggtttcttcgccgaaatcagccgccagctcggc
atcaagctgcaaagcgcccgctgcatccgcatcggccgcctggccttggccgggctgcag
ccggggcaatggcgctatctgcaaccgttcgagcgcttcagattcctccccgcgcccgct
ccgcgcgggctgcccgcctttgcttttccattcgatggcgatgcgcattgtcccgccgcc
gcgggcgccagataccgaacagatcaaggcgcgcggaatcgcctcatgccagaatga
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