Chromobacterium sp. ATCC 53434: CXB49_18980
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Entry
CXB49_18980 CDS
T05234
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chro03021
]
CXB49_18980 (rpoH)
Transcription machinery [BR:
chro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXB49_18980 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_PafC
GAAD
UCR_14kD
KORA
FrhB_FdhB_C
Glyco_hydro_77
Motif
Other DBs
NCBI-ProteinID:
AUH52724
UniProt:
A0A2H5E0B1
LinkDB
All DBs
Position
4274818..4275681
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AA seq
287 aa
AA seq
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MNTTFALPVPSTSGSLEQYIQAVNSVPMLSPEQETELATRFQEENDLEAARQMVLSHLRV
VVSVSRGYAGYGLQQADLIQEGNIGLMKAVKRFEPGRGVRLFSFAIHWIKAEIHEFILRN
WRLVRIATTKPQRKLFFNLRSMKSSFSALSEQEAKSIAEDLGVKPEEVREMEIRMNGQDL
SLLADSDDEDSYAPIDWLADSHSEPTRALERRAFDRLQSEGLEYALSALDARSRRIVEAR
WLADDSGSTLHELAAEFGVSAERIRQIEAKALSKMKTALSEGVVLDN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacatttgctcttccggtcccgtccaccagcggcagcctggagcagtacatc
caggcggtgaacagcgttccgatgctgtcgccggagcaggaaaccgagctcgccacccgt
ttccaggaagaaaacgatctggaagcggcgcggcagatggtgctgtcgcatctgcgcgtg
gtggtatcggtttcgcgcggctacgccggctacggcctgcagcaggcggatctgatccag
gaaggcaatatcggcctgatgaaggcggtcaagcgcttcgaaccgggccgcggcgtgcgc
ctgttctcgttcgccatccactggatcaaggccgaaatccacgaattcatcctgcgcaac
tggcgcctggtgcgcatcgccaccaccaagccgcagcgcaagctgttcttcaatctgcgc
agcatgaagagcagtttctcggcgctgtccgaacaggaagccaagtccatcgccgaagac
ctgggcgtcaagcccgaggaagtgcgcgagatggaaatccgcatgaacggccaggacctg
tcgctgctcgccgacagcgacgacgaagacagctacgcgccgatagactggctggccgac
agccacagcgagccgacccgcgcgctggagcgccgcgccttcgatcgtttgcagtcggaa
ggcctggaatacgccttgtcggcgctggacgcccgcagccgccgcatcgtcgaggcccgc
tggctggccgacgacagcggctcgacgctgcacgagctggccgcggaattcggcgtgtcg
gccgaacgcatccgccagatcgaggccaaggcgctgtccaagatgaagaccgcgctcagc
gagggcgtggtgctggacaactga
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