Chromobacterium sp. ATCC 53434: CXB49_19320
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Entry
CXB49_19320 CDS
T05234
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chro03032
]
CXB49_19320
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_19320
Enzymes [BR:
chro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CXB49_19320
DNA replication proteins [BR:
chro03032
]
Prokaryotic type
DNA Topoisomerases
CXB49_19320
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CXB49_19320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AUH52783
UniProt:
A0A2H5E0F8
LinkDB
All DBs
Position
4337907..4340216
Genome browser
AA seq
769 aa
AA seq
DB search
MPTSLLIVESPSKAKTLKKYLGPDFEVLASYGHVRDLVPKNGAVDPEKDFAMKYQLIARN
SKHVDAIVSAVREADHVYLATDPDREGEAISWHLVQILNSKKLLKDKTAQRVVFHEITKN
AVLDAIQNPRDIAQDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIKAFVQQEYWSVHLDSHKSRTKFSAKLTTLAGKKLDQFDIPNEAEQASVLARLQG
LPATVGTIEKKKKSRSPAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGMDIGQGTVG
LITYMRTDSVVLANEAVEEIRGYIGLKWDADYLPKNPVAYKSKAKNAQEAHEAIRPTSIL
RTPEMVKPFLTTDQFKLYDMIWKRTLACQMAPARFDTTSVDILVGEGVFRASGQVQTFAG
FLAVYEEDVDDAEDEDNAKLPALTEGEDLPVDKLYGEQHFTQPPPRFSEASLVKALEEFG
IGRPSTYASIISTLKDREYVILDKKRFLPTDTGDIVNKFLTEHFAQYVDYNFTAKLENQL
DEIANGGRQWVPVMDTFWKGFKKQIDEKESISRAEVTTESLDEACPKCGQPLSIKFGKRG
RFIACTGYPECDYTRNLGETAEQAAEEAEAPTVIEGRSCPDCGGELHIKKGRYGKFIGCA
NYPKCKHIEPLEKPRETGVTCPECKTGQLIERKSRYGKLFYSCNTYPKCKYATWNPPIAE
PCPKCNWPILTIKTTKRRGTEKVCPQKECGYAEQIAPPEGKDAAPAEEA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccagcctcctgatcgtcgagtcgccctcgaaggcgaaaacgctgaagaaatac
ctgggcccggacttcgaagtcctggcctcctacggccacgtgcgcgatctggtgccgaag
aacggcgccgtcgatccggaaaaagacttcgcgatgaagtaccagctgatcgcgcgcaac
agcaaacacgtcgacgccatcgtcagcgcggtgcgcgaagccgaccacgtctatctggcg
actgacccggaccgcgaaggcgaggccatttcctggcacttggtgcagatcctcaacagc
aagaagctgctgaaggacaagaccgcccagcgcgtggtgttccacgagatcaccaagaac
gcggtgctggacgcgatccagaacccgcgcgacatcgcgcaggatctggtggacgcgcag
caggcgcgccgcgcgctggactatctggtgggcttcaatctgtcgccgctgttgtggaag
aagatacgccgcggcctgtccgccggccgcgtgcagagcccggcgctaaggctgatctgc
gagcgcgagaacgagatcaaggccttcgtccagcaggaatactggtcggtccatctcgac
agccacaagagccgcaccaagttctcggccaagctgaccacgctcgccggcaagaagctc
gaccagttcgacatcccgaacgaggccgagcaggcgtcggtgctggcccggctgcaaggc
ctgccggccaccgtcggcaccatcgagaagaaaaagaaatcgcgcagccccgccgcgccg
ttcaccacctcgacgctgcagcaggaggccgtgcgcaagctgggcatgaccaccgaccgc
gcgatgcgcaccgcgcagcagctgtacgagggcatggacatcggccagggcaccgtcggt
ctgatcacctatatgcgtaccgactcggtggtgctggccaatgaggcggtcgaggaaatc
cgcggctacatcggcctgaaatgggacgccgactacctgccgaaaaacccggtcgcgtac
aagagcaaggccaagaacgctcaggaggcacacgaggcgatccgcccgacttccattctg
cgcacgccggagatggtcaagcccttcctgaccaccgaccagttcaagctgtacgacatg
atctggaaacggacgctggcctgccagatggccccggcccgcttcgacaccaccagcgtc
gacatcctggtcggcgaaggcgtgttccgcgccagcggccaggtgcagaccttcgccggc
ttcctcgccgtctacgaagaggacgtcgacgacgccgaggacgaggacaacgccaagctg
ccggcgctgaccgagggcgaggacctgccggtcgacaagctgtacggcgaacagcacttc
acccagcccccgccgcgcttctccgaagccagcctggtcaaggcgctggaagaattcggc
atcggccggccgtcgacatacgccagcatcatctcgacgctgaaggaccgcgaatacgtg
atcctggacaagaagcgcttcctgccgaccgacaccggcgacatcgtcaacaagttcctg
accgagcacttcgcccagtacgtcgactacaacttcaccgccaagctggagaaccagctg
gacgagatcgccaacggcggccgtcagtgggtaccggtgatggacaccttctggaagggc
ttcaagaagcagatcgacgagaaggaaagcatctcccgcgccgaggtcaccaccgaaagc
ctggacgaagcctgcccgaaatgcggccagccgctgtcgatcaagttcggcaagcgcggc
cgcttcatcgcctgcaccggctatccggaatgcgattacacccgcaacctgggcgagacg
gccgagcaggccgccgaggaagccgaggcgccgacggtgatcgaaggccgctcctgcccg
gactgcggcggcgagctgcacatcaagaagggccgctacggcaagttcatcggctgcgcc
aactatccgaagtgcaagcacatcgaaccgctggagaagccgcgcgagaccggcgtcacc
tgcccggaatgcaagaccggccagctgatcgaacgcaagagccgctacggcaagctgttc
tacagctgcaacacctatccgaagtgcaagtacgcgacgtggaatccgccgatcgccgag
ccgtgcccgaagtgcaactggccgatcctgacgatcaagaccaccaagcgccgcggcacc
gagaaggtgtgcccgcagaaggaatgcggctacgccgagcagatcgcgccgccggaaggc
aaggacgcggcgcccgccgaagaggcgtaa
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integrated database retrieval system
