Chromobacterium sp. ATCC 53434: CXB49_20105
Help
Entry
CXB49_20105 CDS
T05234
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CXB49_20105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
chro02022
]
CXB49_20105
02035 Bacterial motility proteins [BR:
chro02035
]
CXB49_20105
Two-component system [BR:
chro02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CXB49_20105
Bacterial motility proteins [BR:
chro02035
]
Pilus system
Twitching motility proteins
CXB49_20105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AUH52924
UniProt:
A0A2H5E0X2
LinkDB
All DBs
Position
complement(4517491..4518810)
Genome browser
AA seq
439 aa
AA seq
DB search
MTKTPLRVLVVDDEPDIRELLELTLAKMGLAPVCAGSVAEARSALAAGAFDLALTDMRLP
DGEGLEVVRHIGEAGLDVPIAVLTAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKSA
LRVESPARPAPQPRLLGESPAIRDVLRLVEKLARSQAAVYISGESGTGKEQAARLIHELG
PRAGRPFVAVNCGAIPESLMESEFFGCRKGAFTGADADRDGFFQQTQGGTLFLDEVAELP
LAMQVKLLRAIQEKAVRRLGASQEEAVDARIICATHRDLAAGVEDGAFRQDLYYRLNVLP
LKMPPLRELRDDIPLFAQRLLRRYAGGDGAPQLTADALRALQDYAYPGNFRELENILERA
VALASGPVLGRGELQLTPPAEHAPEPGSAEPLQDYLDRVEREAIVKALDATRYNRTQAAK
RLGLTFRSLRYRMERLGVK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacaccgttgcgcgtactggtcgtcgacgacgaacccgacatccgcgagctg
ctggaactgacgctggccaagatgggcctggcgccggtgtgcgccggcagcgtggccgag
gcgcgcagcgcgctggcggccggcgccttcgatctggcgctgactgatatgcggctgccc
gacggcgaggggctggaggtggtgcgccatatcggcgaggccggcctggacgtgcccatc
gcggtgctgaccgcctacggcagcgccgacaacgcggtgcgggcgatgaaggccggcgcc
ttcgattatctgcaaaagccggtcagcctggcgcaactgcgcagcctggtgaagtcggcg
ctgcgggtggagtcgccggcccggccggcgccgcagccgcggctgttgggcgaatcgccg
gcgatacgggacgtgttgcggctggtggagaagctggcgcgcagccaggcggcggtctac
atcagcggcgagtccggcaccggcaaggagcaggcggcgcggctgatccacgaactgggg
ccgcgcgccggccggcctttcgtcgccgtcaactgcggcgcgattccggaaagcctgatg
gagagcgagtttttcggctgccgcaagggggccttcaccggcgccgacgccgaccgcgac
ggcttcttccagcagacccagggcggcacgctgtttctcgacgaggtggccgagctgccg
ctggcgatgcaggtcaagctgctgcgcgcgatccaggaaaaggccgtgcgtcggctgggc
gccagccaggaggaggcggtggacgcgcgcatcatctgcgccacccaccgggacctggcg
gccggggtcgaggacggcgccttccgccaggacctgtactaccgcctgaatgtgctgccg
ctgaaaatgccgccgctgcgcgagttgcgcgacgacattcccttgttcgcccagcggttg
ctgcggcgctacgccggcggcgacggcgcgccgcagctgacggccgacgccttgagagcg
ttgcaggactacgcctatcccggcaacttccgcgagctggagaacatcctggagcgggcg
gtggcgctggcctccgggccggtgctgggccgcggcgagttgcaactgacgccgccggcc
gagcacgcgccggagccgggcagcgccgagccgctgcaggactatctggaccgcgtcgag
cgcgaggccatcgtcaaggcgctggacgccacccgctacaaccgcacccaggcggccaag
cggctgggcctgactttccgttcgctgaggtaccggatggagcggctgggagtgaagtag
DBGET
integrated database retrieval system
