Chromobacterium sp. ATCC 53434: CXB49_20870
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Entry
CXB49_20870 CDS
T05234
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03420
Nucleotide excision repair
chro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXB49_20870
03430 Mismatch repair
CXB49_20870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_20870
Enzymes [BR:
chro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXB49_20870
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXB49_20870
MMR (mismatch excision repair)
Other MMR factors
CXB49_20870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUH53069
LinkDB
All DBs
Position
4684490..4686628
Genome browser
AA seq
712 aa
AA seq
DB search
MSDLLAGLNPEQLRAVTWPAKSALVLAGAGSGKTRVLTTRIAWLLSTSQTSPAGLLAVTF
TNKAAREMQTRLSAQVPVNVRTMWIGTFHGLCNRFLRIHYRDAGLPQTFQILDSADQQAA
IKRLLKSLELSDEKYPPRAVQSFINGNKEAGVRAEALPPALNPYEAKLVELYAAYDAQCR
REGVVDFAELLLRSYELLSRNEALRAHYSGRFAHILVDEFQDTNRLQYAWLKLLAGEHGA
LFAVGDDDQSIYAFRGAEVGNMRALLSDFQVAEPVRLEQNYRSMGHILNAANALIEKNDG
RLGKNLWTDAGDGEKIRFFQAGSDGEEAEFIVDEAKSLHREGLALSDMAVLYRSNAQSRL
LEHVLVNAQIPYRIYGGLRFFERQEIKHALAYLRLVANPDDDNALLRVINVPARGIGARS
VEGLQAVGREQGISLWQAACGAGSGRTAAKIGEFVLLIERMREQSRDFSLAETISLVIDR
SGLRDMYEQDKKDGEERLANLDELINAAASFMPDQPEQALTEFLSAASLEAGEHQADAGS
DALQLMTVHAAKGLEFDAVFVSGLEEGLFPHENSVMDGKGLQEERRLMYVAITRARKRLY
LSSAQSRMLHGQSRYPIPSRFIDEIPAELIHSLSATVKTPAAPAARQSAAMPRRQADNDY
GLRIGQSVSHAKFGVGVVINAEGGGADVRLQINFAEHGVKWLDLRYAKLTPA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctgttagccggtctgaatcccgaacaactgcgcgcggtcacctggccggcc
aagagcgcgctggtgctggccggcgccggcagcggcaagacgcgggtgctgaccacccgc
atcgcctggctgttgtccaccagccagacctcgccggcgggcttgctggcggtgaccttc
accaacaaggccgcgcgcgagatgcagacccggctgtcggcccaggtgccggtcaatgtc
cgcacgatgtggataggcaccttccacggcctgtgcaaccgcttcctgcgcatacactat
cgcgacgccggcctgccgcagaccttccagatcctcgattccgccgaccagcaggcggcg
atcaagcggctgctgaaaagcctggaactgtcggacgagaaatacccgccgcgcgcggtg
cagagcttcatcaacggcaacaaggaagccggcgtgcgcgccgaggcgctgccgccggcg
ctgaatccgtacgaggccaagctggttgagctgtacgccgcctacgacgcccagtgccgc
cgcgaaggcgtggtcgacttcgccgagctgctgctcagaagctacgagctcctgtcgcgc
aacgaggcgctgcgcgctcattacagcggccgcttcgcccacatcctggtcgacgagttc
caggacaccaaccggctgcaatacgcgtggctgaaactgttggccggcgagcacggcgcg
ctgttcgccgtcggcgacgacgatcagagcatctacgctttccgcggcgccgaggtcggc
aatatgcgcgcgctgctatccgacttccaggtggccgaaccggtgcggctggagcagaac
taccgctcgatgggccacatcctgaacgccgccaacgcgctgatcgagaagaacgacggc
cgtctcggcaagaatttgtggaccgacgccggtgacggcgaaaaaatccgcttcttccag
gccggcagcgacggcgaggaggccgagttcatcgtcgacgaggccaagagtctgcaccgc
gaagggctggcgctgtccgacatggccgtgctgtaccgctccaacgcccagtctcggctg
ctggaacacgtgctggtcaacgcccagattccgtaccgcatctacggcggcctgcgcttc
ttcgaacggcaggagatcaagcacgcgctggcctatctgcggctggttgccaatccggac
gacgacaacgcgctgctcagagtgatcaatgtgccggcgcgcggcataggcgcgcgcagc
gtcgagggcctgcaggccgtcggccgcgagcagggcatctcgctgtggcaggccgcctgc
ggcgccggcagcggccgcaccgccgccaagataggcgaattcgtgctgctgatagagcgg
atgcgcgagcagagccgcgacttcagcctggccgaaaccatcagcctggtcatagaccgc
agcggcctgcgcgacatgtacgaacaggacaagaaggacggcgaggagcggctggccaac
ctcgacgaactgatcaacgccgccgccagcttcatgccggaccagccggagcaggcgctg
accgaattcctgtccgccgccagcctggaggccggcgagcaccaggccgacgccggcagc
gacgcgctgcagctgatgacggtgcacgccgccaagggcctggagtttgacgccgtcttc
gtcagcggcctggaagaaggcctgttcccgcacgagaacagcgtgatggacggcaagggc
ctgcaggaagagcgtcggctgatgtatgtggcgatcacccgcgcccgcaagcggctctat
ctgtccagcgcgcaaagccggatgctgcacggccagagccgctacccgataccgtcgcgc
ttcatcgacgagattccggcggaactgatccattctctgtctgctacagtgaaaacaccc
gccgcgccggcggctagacagtcggccgcgatgccgcgccgccaggccgacaacgactac
ggcctgcgcatcggccagtcggtcagccacgccaagttcggcgtcggggtggtgatcaac
gccgaaggcggcggcgcggacgtgcggctgcagatcaatttcgccgaacacggcgtgaag
tggctggatctgcgctacgccaagctgacgccggcctga
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