Chryseobacterium sp. POL2: G6R40_00925
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Entry
G6R40_00925 CDS
T11017
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G6R40_00925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrp03019
]
G6R40_00925 (recQ)
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_00925 (recQ)
Enzymes [BR:
chrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6R40_00925 (recQ)
Messenger RNA biogenesis [BR:
chrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G6R40_00925 (recQ)
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G6R40_00925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QIG88301
UniProt:
A0A6G6YDT6
LinkDB
All DBs
Position
212786..214993
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AA seq
735 aa
AA seq
DB search
MDTKNIDLSKELKKYFGFSTFKGQQQEIVKTLLDSKDVFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSEESGVAHVLNSSLNKAQTKQVFDDIKTGKTKLLYVA
PESLIKEEYVDFLRDVKISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIADVPVMALTA
TATPKVQDDIQKTLGMNNAQVFKESFNRANLFYEIRPKVNVDKEIVKFINHHKGKSGIIY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKTRITNQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGLCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYLLHYFGEKFDPEHGQGAKMCDNSVNPPKLIEAVVDLKFV
LKIIKELGEKFRTKDLISIIGGKETAVTKSYKLEKSEFFGAGKEKSDNYWKSIIRQATVQ
EYLKKDIETYGVLKISAKGLEMLDGQCTDSFFIAEDRQYDLAQTKKTDAEQVQVQAGGGL
DQVLFGQLKELRKKIAHKLGIPPYTVFMDPSLEDMTVQYPISLEEIAKIYGVGEGKAKKY
GKDFAEFIKKYVEENNIERMQDMVLKQVANKSSHKVFIIQNTDKKLDFEDIARAKNLSMV
ELLKEMEAIVYQGTKLNIDYYIDENFDEDIVDEFMDFMKDSESDSMKVLTGEFGDDLSDE
EIRMLRIKFISDVAN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaagaacatcgacttatcaaaggagttaaaaaaatactttggcttttcaact
tttaaaggacaacaacaagaaattgtaaaaacacttttggattcaaaagatgtatttgtt
ttgatgccgacaggtggcggaaaatcactttgttatcaattgccagctttgatttcggaa
ggtactgcaattgtagtttcaccgcttattgccttgatgaaaaatcaggtcgatgcggtt
aatggactttcagaagaaagtggtgtagcgcatgttcttaattcttctcttaataaagca
caaaccaaacaggtttttgatgatattaaaactggaaaaacaaaattgctatatgtagca
ccagaatctttgataaaagaagaatatgttgactttcttcgcgatgtcaaaatatctttt
gtagccattgatgaggcgcattgtatctctgaatggggacacgattttcgtccagaatat
cgtaatctaaaaggaattattgataaaattgcagatgttcccgtgatggcgcttaccgca
acggcaacgccgaaagttcaagacgatatccaaaaaactttggggatgaataatgctcag
gtttttaaagaaagttttaacagagccaatttgttttatgaaatacgtcctaaagttaat
gtcgataaagaaatcgtaaaattcatcaaccaccataaagggaaatctggaattatctat
tgtcttagccgtagaaaagttgaagaatttgcacaacttcttcaggttaatggtattaat
gcattgccttatcatgctggcttggatcagaaaacaagaataaccaatcaagataaattc
ttgatggaagaagttgatgttatcgtggcaactatcgcttttggaatggggattgacaag
ccagatgtacgatttgtcatccattacgatattccaaaatctttggaaagttattatcaa
gaaacaggacgtgcaggcagggatggtggcgaaggtctttgtttggctttttatgatcca
aaggatattgagaaattagaaaaatttctagctcaaaaacctgtgtcagaaagagaaatc
ggtttacaactgcttaacgaagttgtaggttatgtagaaacctcgatgagccgccgccaa
tatttattgcattattttggtgaaaagtttgatccagaacatggacaaggtgccaaaatg
tgtgataactcagttaatcctccaaaactaattgaagctgttgtagatttaaaatttgtt
ttaaaaattataaaagaacttggtgaaaaattcagaaccaaagatcttatttccattatt
ggcgggaaagaaacagctgtgaccaagtcttataaattagaaaaatcagaattctttggg
gctggaaaagagaaaagtgataattattggaaatccattattcgccaagcgaccgtgcag
gaatatctaaaaaaagatatagaaacctatggcgttctcaagatttctgcgaaaggattg
gaaatgctagacggacaatgtacagattcttttttcatcgcggaagatagacaatatgat
ttagctcaaaccaaaaaaacagatgctgaacaagtccaggtacaagctggaggtggtttg
gatcaggttttattcggacaactgaaagagcttcgcaagaaaattgcccacaaattagga
attccgccgtacaccgtttttatggatcctagcttggaagatatgacggtgcaatacccg
attagcttggaagaaattgcgaaaatctatggtgttggcgaagggaaagctaaaaaatat
ggaaaagattttgccgaatttataaaaaaatatgttgaagaaaataatatcgagcgtatg
caggatatggttctgaaacaagtcgctaacaagtcgagtcataaggtttttattatacag
aataccgataaaaaactggattttgaagatattgcaagagcgaaaaacttatcaatggta
gagcttttgaaagaaatggaagctattgtttatcaaggaactaaactgaatatcgattat
tatattgatgagaattttgatgaagatattgtcgatgaatttatggactttatgaaagat
tctgaaagtgacagcatgaaagtccttacaggagaatttggtgatgatctttcggatgaa
gaaatccgaatgttacgtattaaattcattagcgatgtcgccaattaa
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