Chryseobacterium sp. POL2: G6R40_04145
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Entry
G6R40_04145 CDS
T11017
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03030
DNA replication
chrp03410
Base excision repair
chrp03420
Nucleotide excision repair
chrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G6R40_04145 (polA)
03410 Base excision repair
G6R40_04145 (polA)
03420 Nucleotide excision repair
G6R40_04145 (polA)
03440 Homologous recombination
G6R40_04145 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrp03032
]
G6R40_04145 (polA)
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_04145 (polA)
Enzymes [BR:
chrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G6R40_04145 (polA)
DNA replication proteins [BR:
chrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G6R40_04145 (polA)
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G6R40_04145 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6R40_04145 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DUF3519
DUF3856
Motif
Other DBs
NCBI-ProteinID:
QIG88909
LinkDB
All DBs
Position
complement(877969..880788)
Genome browser
AA seq
939 aa
AA seq
DB search
MTTDKRLFLIDAYAMIFRGYYAFIRNPRLSTKGLDTSAIFGFTNSLIELIKRERPTHLAV
VFDVGRTNVRHEDYSDYKANRAETPEAIIIAKPYIHDILKAMHIPILGVEGYEADDVIGT
LSCKASEKDYQVFMVTPDKDFAQLVTDKVKIYKPGLKGGDIEILGVEEVKAKYDVDDPKQ
IIDYLGMMGDAVDNIPGLEGVGEKTAKKFIKEYGSMENLLANTHELKGKLKEKVEASAER
GLLSKKLATILCDAPVEFHEKDYDLETPDFEKVKEIFDELEFRRLYENLYRAFATDTNAT
SIANDNVSKSDKAAKPQATQLDLFANFEELNEATTTKSNIKENDHLYQYIDQPKAMQILL
KNLLMQPAVCFDTETTSLNELEAQLIGMSFSYKSGLAYYIPIPEDQEKAQEIVEIFRPFF
ESEDVLKIAHNLKYDYKVLRNYNIEVKGPMFDTMIAHYLLNPDGRHGMDYLSEMYLNYTP
ISIESLIGKKGKNQLTLREVNLAEQTAYAAEDADITFQLYQLFAPQLKKENLEDVFLNIE
MPLMNVLANMELAGVKLDSDWLKKESLDLENDLRNLEIQIFELSGEEFNMNSPKQLGEVL
FEKLKLDPKAKKTKTGQYATSEDVLQKLASKHEIIALILDYRQLQKLKSTYVDALPNQID
PIDNRVHTTYAQTVAATGRLASVNPNLQNIPIRTLRGQQIRGAFVADEGKKIISADYSQI
ELRLIAEISNEENMIEAFQNGEDIHAATAAKLFKIPIEEVSKTQRSQAKSVNFGIIYGQG
AFGLADQTGMSRTEAKAMIDAYFQTYPRLKEYMSEQVENARKNGYVVTMLGRKRHLNDIN
STNFVVKGHAERNAVNAPIQGSAADIIKLAMIKIDQVLKEKNLKTKMLLQVHDELIFEAP
LEEVDEVSKLIKDAMESAYSTKVPLTVEVGVGDNWLEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagataaaagactttttctaattgatgcatacgcgatgatttttcgtggttat
tacgcatttattagaaatcctagactttcaacaaaaggattggatacatcggcgattttt
ggttttacaaattctttgatagagcttatcaaaagagaacgccctacacatttggcagtc
gtttttgatgtcggaagaaccaatgtccgccacgaggattatagcgattataaagcgaat
agagccgaaacgccggaagctataattatagcaaaaccttatattcatgacatcttaaaa
gcgatgcatattcctattttaggagtagaaggctacgaagcggacgatgttattggtact
ttgtcttgtaaagcttcagagaaagattatcaggtttttatggtaacgcccgataaagat
tttgcccaattggtaaccgataaagttaaaatatataaacccggattaaaaggtggcgat
atcgaaattctaggtgttgaagaagttaaagccaaatatgatgttgatgatcccaaacaa
attatcgattatctaggaatgatgggcgatgctgtggataatattccaggattggaaggt
gttggcgaaaagaccgctaaaaaatttattaaagaatacggctcaatggaaaatctattg
gccaatacacatgaactgaaaggtaaactaaaagaaaaagtggaagcaagcgccgaacgc
ggtttgttgtcaaaaaaacttgcaaccattctttgcgatgccccagtggagtttcatgaa
aaagattatgatcttgaaacgccagattttgaaaaagtaaaagaaatctttgatgaactg
gaatttcgtcgactttatgaaaatttataccgagcttttgcaacagacacaaacgccaca
agcattgccaatgacaatgtttctaaatctgataaagccgcaaaaccacaagcaacgcag
ctggatctttttgctaattttgaagaactaaacgaggcgacgacgacaaaatcaaatatt
aaagaaaacgatcatctctatcaatacatcgaccaaccaaaggccatgcagattttactt
aaaaatttgttgatgcaacctgccgtttgtttcgatacagaaactacgtcacttaatgag
ctagaagcacaacttatcggaatgagtttctcctataaatcgggattagcttattatatt
ccgattcccgaagaccaagaaaaagcacaagaaattgttgaaattttccgtccgtttttt
gaaagcgaagatgttcttaaaattgctcacaacctcaaatacgattataaagttctcaga
aattacaatatcgaagtcaaaggtccaatgtttgacaccatgattgcacattatttactg
aatccagatggacgtcatggtatggattatctttcggaaatgtatctcaattatacacct
atttctatcgaaagtttaatcgggaaaaaaggtaaaaaccaattgacgttgcgagaagta
aatttggcagaacaaaccgcttatgctgcagaagatgccgatataacgtttcaattgtat
caactttttgcacctcagttgaagaaagaaaatcttgaagatgtctttctgaatattgaa
atgcctttgatgaatgtcttagctaatatggaattggcaggcgtaaaacttgattccgat
tggctaaaaaaggaaagcctagatttagaaaatgatcttagaaatttagaaattcaaatt
tttgaattgtccggcgaagagtttaatatgaactcgccaaaacaattaggcgaagtttta
tttgaaaaattaaagctcgatcctaaagccaagaaaacaaaaacaggacaatatgccacc
tccgaagatgtcctgcagaaattggcttcaaaacacgaaattatcgcattaatattagat
tatcgtcaactgcaaaaactaaaatccacttatgttgatgcattgcccaatcagatagat
ccgatagacaaccgcgtgcatacgacttatgcgcaaactgtggctgccacaggccgtttg
gcgagtgttaatcctaatttacaaaacattcctatccgtacattacgcggacaacagatt
cggggtgcttttgtagcggatgaaggtaagaagataatttctgccgattattcgcagata
gaattgcgccttattgctgaaatttcgaatgaagaaaatatgattgaagccttccaaaat
ggtgaagatatccatgctgcaacggctgcaaaattatttaaaatcccaattgaagaagtt
tcaaaaacgcaacgttcgcaagccaaaagtgtcaactttgggattatttatggacaaggt
gcttttggattagcggaccaaaccggcatgtcaagaaccgaagcgaaagctatgattgat
gcttatttccaaacctatccacgtcttaaagaatatatgtcggagcaagttgaaaatgct
agaaaaaatggttacgttgtaacaatgttgggaagaaaacgacatcttaatgacatcaac
tctaccaattttgtagtgaaaggtcatgcggaacgtaacgcggtgaatgctcccatacaa
ggtagtgcggcggatatcatcaaattggcaatgattaaaattgatcaagttttaaaagag
aaaaatttaaaaaccaaaatgctgctgcaagtgcatgacgaattaatttttgaagcacct
ttggaagaagttgatgaggtttctaaacttataaaagacgctatggaatcggcttattct
accaaagtgcctttaacggttgaagttggtgttggtgataactggttagaggctcattaa
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