Chryseobacterium sp. POL2: G6R40_05560
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Entry
G6R40_05560 CDS
T11017
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chrp Chryseobacterium sp. POL2
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrp03009
]
G6R40_05560 (rimO)
Enzymes [BR:
chrp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G6R40_05560 (rimO)
Ribosome biogenesis [BR:
chrp03009
]
Prokaryotic type
ribosomal protein modification factors
G6R40_05560 (rimO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIG89172
LinkDB
All DBs
Position
complement(1196518..1197819)
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AA seq
433 aa
AA seq
DB search
MRTKSTGKKKINIVTLGCSKNVYDSEVLMGQLQANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDFVEAKSRGEVEQVFVTGCLSERYKPDLIREIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHISTPIEKLVEEASKLA
KKGTKELILIAQDLTYYGLDIYKRRALGDLLKELVKIDGIDWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEERFLELKDWVREQRFDRLGCFTYSHEENTTAHVLEDDVPQEVKEARVEEIMELQSQ
ISWEKNQERIGKVYKCIFDRKEGNYFVGRTEFDSPDVDNTVLVSAVDTYISIGDFANVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcaacaggtaaaaagaaaattaatatagtaacgcttggatgttccaag
aatgtctacgactccgaagtgttaatgggccaactacaagccaatggtaaagaagtcgta
cacgaagatcgcggcgatattgtggtgatcaacacttgtggttttatcgataatgctaaa
gaagagtcgattaatacaattctagattttgtcgaggccaaaagtagaggcgaagtagaa
caggttttcgtaacgggatgtttgtcggagcgctataagcctgacttgattcgtgaaatt
cctgatgttgaccaatatttcggaacccgcgatttgcctattttattaaaacatcttggc
gccgattataagcacgaattggttggagaacgtcttacaacaacaccaaaacactatgcc
tatcttaaaatatccgaaggttgcgatagaccatgttccttttgcgccattcctttgatg
cgtggcggacacatttccacgcccatcgaaaaattggtggaagaagcttcaaaattagcc
aagaaaggaactaaggaattgattttaatcgcacaagatcttacctattacgggttggat
atctataaaagacgcgcattaggcgatttgctgaaagaattggttaaaattgatggtatc
gattggattcgacttcattatgcgtttccatcaggatttccagaagatgttttggacatt
attcgtgaagaaccgaaagtttgtaactatatcgacattccgttgcaacacatcaattcg
gatttgttgaaatctatgaagcgtggaacaacacacgaaaagaccgatgcgcttttggct
aaattccgtgagaaagttccagatatggctattcgtacaaccttgattgttggctatcct
ggcgaaaccgaagagcgcttcctagaattaaaagattgggtgcgcgagcaaaggtttgac
cgattgggatgtttcacctattcgcatgaagaaaatacaacagcacatgttttggaagat
gatgttcctcaggaagttaaagaagcccgtgtagaagagattatggagttgcaatcgcaa
atatcttgggagaaaaatcaagaacgtatcggaaaggtttataaatgtatttttgatcgc
aaagaaggtaattatttcgttggtagaacggagttcgattcgccggacgttgataataca
gttttggtttctgctgtagatacctatatttcgattggcgattttgcaaatgtgaagatt
acttctgcagaagaattcgatttgtatggtgaattgatttaa
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