Chryseobacterium sp. POL2: G6R40_06590
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Entry
G6R40_06590 CDS
T11017
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03030
DNA replication
chrp03430
Mismatch repair
chrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G6R40_06590 (dnaE)
03430 Mismatch repair
G6R40_06590 (dnaE)
03440 Homologous recombination
G6R40_06590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrp03032
]
G6R40_06590 (dnaE)
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_06590 (dnaE)
Enzymes [BR:
chrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G6R40_06590 (dnaE)
DNA replication proteins [BR:
chrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G6R40_06590 (dnaE)
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G6R40_06590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIG89367
UniProt:
A0A6G6YGZ8
LinkDB
All DBs
Position
complement(1427524..1432170)
Genome browser
AA seq
1548 aa
AA seq
DB search
MYLVFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQLHDEEGNLVENQDYIIKPEAYDIPF
NATRIHGISTKMAQEEGRDLQEVLLEFSEVLSRSKVVSGHNVEFDYNIVGAEFFRKEITD
NLQEKPKADTMHLGTGFCKLGGGRNGRYKSPKLGELYEKLYGTDFDEAHNAAADVNATAQ
VFFEMMRIGLIPADLLKISEDQLKLYQKLHPEPIQPFDIVIRRQVAGFNNKKKKQDFGSI
DEIDLGKYFNFNSHSVYSTLQASSSINDLIKIATTENYPAVGMVDIGNMMGAFKFVSAVE
AVNGDREKAYKSYLEKKQEAEEKSEDFTEEEPNKEPLIPIIGCEFFISDRYEQKQFTKDD
PDKRTQMVLLAKDFEGYKNLAKLSSIGFVKGFYFGVPRISREVISQYKEGLIALTSSING
DIPDAILNIGEQKGEERFKWWKEEFGDDFYVQIQNHNLPEEEHLNDVLLQFAEKYEVKIL
AQNETFYTHKEDANIQDILVCIKDGEKLSTPVGKGFGKRKGLNTQEYYIKTGDELKRAFQ
DYPDAFDAYEEFVGKFKPYRLKRDVLLPKFDIPEQFVHPEDEVDGGKRGEMAYLTHLTYE
GAKKRYVETGITDEIKERLDFELDVIANTGYPGYFLIVQDFCNEARNMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDKIIKWVVEKYGKTQ
VAQIITYSILGGKSAIKDAGRVLDLPIPDTNNIAKLIPSTPGMNIAKALAKYDKLKPEEQ
LLVDEMKMVLDDPNDHRHQVLASAKKMEGCVRNTGIHACGVIITPEDVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKQRYDIDIDPDLIPLDDAKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLDEGPLEKIWNDWKAFAEYAFNKSHSTCYAFIAYQTAYLKANYPAEYMA
SVMSNNINNTDQITMFMEDCKSMGVDVLGPDVNESQYKFAVNEKGQIRFGLGAIKGIGEG
PSEAIYEERQNGKFKNIYEFFERVPSSQVNKRVVESLVIAGAFDGLDDYHRAQYFDIDNS
GKTNVERLIRYGQSFHEGKNEVENSLFADFADEIQIEKPKLLPCAEWPNMYKLNKEKESI
GFYLSAHPLDEFKYQFQFIQGVLSKKAVLESQNDEVPQDTMDALLSLEEDKEDDVSFDID
VEDPDGTSELVETSKKQAEPKGSFNFFNLDELDYFKDNVFPKLAKPAEEKKDWRNRDKDT
GKEYSVAGLITEYRVQDGFKSGEKVAFVTLEDYTGSYSFRLGDRDYMKLKEKLEVQRFVI
LKIKFAQVKDGRVFVNVNDVIELKEAFDKFAKSMSVVVSLDSLRPSDINFFKNSFLGHDY
GDQKLSFFVKNPEDNSVIELVSMQHRIKINDELLSIVHDVNNYEVFLN
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagttttcgataccgaaacaactggtttaccaaagaattttaacgctccttta
tcagactcggacaactggccgcgcatggtgcagattgcttggcaattacacgatgaagaa
ggtaatcttgtagaaaatcaggattatatcataaagcctgaggcttatgatattccgttt
aatgcaacaagaattcatggtatttccacgaaaatggcgcaggaagaaggtcgtgatctt
caggaggttttgttagaattttctgaagtcttgagtcgttctaaagttgtgtctggtcat
aatgtagaattcgattacaatattgttggcgcagaatttttccgaaaagaaattaccgat
aatttgcaagaaaaaccaaaagcggataccatgcatttggggaccggcttttgtaaatta
ggtggcggtagaaatggaaggtacaaatcgccgaaattgggtgagctttacgaaaaactc
tatggaaccgatttcgatgaagcgcacaatgccgcagccgatgttaatgcgacggcacag
gtcttttttgagatgatgagaattggtcttatcccagcagatctattaaagatttcggaa
gatcaacttaagctttatcaaaaattacatccagagccgatccagccttttgatattgtt
attcgtcggcaggtagctgggtttaataacaaaaagaaaaagcaagattttggaagtatt
gacgagattgatcttggtaaatatttcaactttaatagtcacagtgtttattccacattg
caagcgtcgtctagtattaacgatttaattaaaatcgcaaccacagaaaattatcctgca
gttgggatggtggatattgggaatatgatgggcgctttcaaatttgtttctgctgtggaa
gctgttaatggcgatcgcgaaaaagcctataaatcttaccttgaaaagaaacaagaagcg
gaagaaaagtcggaagattttacagaggaagaacctaacaaagaacctttgattccgatt
atcggttgcgagttttttatatcagatcggtacgagcaaaaacaatttaccaaagatgat
ccagataaaagaacacaaatggtgcttcttgccaaggattttgaaggttataaaaattta
gcaaaactgtctagtatcggttttgttaagggattttattttggtgttccaagaattagt
cgagaagttatttcccaatacaaagaaggcttgattgctttaacctcaagtattaatggt
gatattccagatgcgattcttaacataggggaacaaaaaggtgaggagcgtttcaaatgg
tggaaagaggagtttggggatgatttttatgttcagattcagaatcataatttgccagaa
gaagaacacctcaacgacgtacttttgcaatttgctgagaaatatgaagttaaaatttta
gcacaaaacgaaactttttatacccataaagaagatgccaatatccaagatattttggta
tgtataaaagatggtgaaaaattgtcaacgcctgttggtaaaggttttgggaaacgtaaa
ggtcttaacacgcaagaatattatataaaaactggtgatgagctcaaacgtgcatttcag
gattatcctgatgcttttgatgcttatgaagagtttgtaggaaagtttaaaccttatcgt
ttgaaacgtgatgttttgcttccgaagttcgatattccagaacagtttgtccatccagaa
gatgaggttgatggtggaaagcgtggcgaaatggcatatttgacccatttgacttatgaa
ggagctaagaaaagatatgtcgaaacgggcattaccgatgagatcaaagaacgtcttgat
tttgagctcgatgttatcgcgaatacaggttatccgggttactttttgattgtacaggat
ttctgtaacgaagctagaaatatgggcgtttgggttggtccaggacgtgggtcggcagca
ggttcggcggtggcatattgcatcggaattaccaatgttgatcccattaaatatgatttg
ctatttgagcgttttcttaatccagagcgtgtatcgatgccagatattgatatcgacttt
gatgatgaaggccgtgacaaaattatcaaatgggtggttgaaaaatatggtaaaacgcaa
gttgcgcagatcattacatattcaattcttgggggtaagtcggcgattaaagacgctgga
agggttttggatcttccaattcccgataccaacaatatcgctaaattgattccttccaca
ccaggaatgaacatcgctaaagctttagcaaagtatgataaactaaaaccagaagaacag
cttttggtggatgaaatgaaaatggtgttggatgatcccaatgatcatcgtcaccaggtt
ttggctagtgcaaaaaaaatggaaggttgcgtaagaaatacagggattcatgcttgtggg
gttattattacgccagaagatgttagcaatcttgttcctgtaactattgctgcaaaagac
gctgatattttggtttcacaatttgataactcggtggcggaaagtgccggtcttttgaag
atggacttcctaggattaagaacgcttacgattattaaagatgctttgaagttggtaaaa
caacgatacgatattgatattgatcccgatcttattcccttggatgatgccaaaacctat
caattatttaaagaaggaagaacggttggaattttccaatacgaaagtcccggaatgcaa
aaatatatgcgtgagctgaaaccaacggtttttgctgaccttattgccatgaatgcactt
taccgtccaggccctatcaagtatatcccgaactttattaatcgtaaacacgggattgag
gaaatcgtttatgatttaccagaaaccgaagaatatcttaaagaaacctacggtattacg
gtgtatcaagagcaggtaatgttgctgtcgcagaagttggcaaactttacaaaaggggag
gccgatacgttaagaaaagcaatgggtaaaaagcaaattgatgttcttaataaaatgtat
ccgaaattcatagaaggcggacgaaaaaataatctcgatgaaggacctttagaaaaaatt
tggaacgactggaaagcctttgcagaatatgcttttaacaagtcgcactctacatgttat
gcgtttattgcttaccaaacggcttatcttaaagccaattatcccgcagaatatatggcg
agtgtgatgagtaataacatcaacaatacggatcagattaccatgttcatggaagattgc
aaaagtatgggcgttgatgttttgggaccagatgttaacgaatcgcagtacaaatttgca
gttaacgaaaaaggtcaaattcgatttggtttgggagcgattaaaggtattggagaagga
ccaagcgaggcgatttatgaagagcgacaaaatggaaaattcaaaaatatatatgagttt
tttgagcgcgtaccaagttcgcaggttaacaaacgtgttgtcgaaagtttggtaatcgct
ggtgctttcgatggtttggatgattatcatcgtgcgcaatattttgatatcgataattct
ggcaaaaccaatgtggaacggctgatccgctatggacaaagtttccatgaaggtaaaaat
gaagtcgaaaactctttgtttgctgattttgctgacgaaatccaaatagaaaagccaaaa
cttttgccttgtgcagaatggccaaacatgtacaagctgaataaagaaaaagaaagtatc
ggtttctacctttcggcgcatcctttggatgaattcaaatatcagtttcagtttatacaa
ggggttttgtccaaaaaagcagttttggaaagtcagaacgatgaggtgcctcaagataca
atggatgctttattaagtttagaagaagataaagaagatgatgttagttttgatatcgat
gttgaagatccagacggtacttcagaattggtagaaacttctaaaaaacaagcagagcca
aaaggcagttttaatttctttaatctcgacgagttagattattttaaagacaatgtattc
ccgaagttggcaaaaccagccgaagaaaagaaagattggcgcaaccgtgataaagacaca
gggaaagaatattctgtggcgggacttatcacagaatatcgtgtgcaggatggcttcaaa
agtggtgagaaagttgcgtttgtaaccttggaggattatacaggctcttactcttttcgg
ttgggcgatcgcgattatatgaaactgaaagaaaaattggaagttcagcgatttgtcatt
ttgaaaatcaaatttgcgcaagttaaagacggtcgtgtatttgtcaatgttaacgatgtt
attgaacttaaagaagcttttgacaagtttgcaaaaagtatgtcggtggtggttagtctg
gatagtttgcgcccttcggatattaactttttcaaaaactcatttttgggacacgattat
ggtgatcaaaaactaagcttctttgtcaaaaaccctgaagataacagcgttatcgaattg
gtatccatgcaacatcgcatcaagatcaacgatgaattgctcagcatagtacacgatgtt
aacaactacgaagttttcctaaactaa
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