Chryseobacterium sp. POL2: G6R40_06820
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Entry
G6R40_06820 CDS
T11017
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G6R40_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrp03019
]
G6R40_06820
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_06820
Enzymes [BR:
chrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6R40_06820
Messenger RNA biogenesis [BR:
chrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G6R40_06820
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G6R40_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Thioredoxin_8
Motif
Other DBs
NCBI-ProteinID:
QIG89408
UniProt:
A0A6G6YHD6
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Position
complement(1482225..1484126)
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AA seq
633 aa
AA seq
DB search
MNIDSHLTNILHENLQKYWGYSQFREDQEAIISSVVQGQDVLALLPTGGGKSLCYQLPAI
ILEGTCLVISPLLALIKDQVSSLEELGVEAEFLSSEFDDAEVEDVFTRCIEGFTKVLYVS
PERLKNQEFLRRIPEINISFIAVDEAHCISEWGQDFRPSYQNIKFFREEFKNVPLLALTA
TATSEVVEEIVAKLSLKKVQIFKKSFERNNLNIISVNITDKYQKIKDFLLQNRTAGIIYT
RTRKEAEELSHFLQNSGLEQVNFYHAGLPRKDKERLQKQWQASHSRVLVSTNAFGMGIDK
DNVRFVIHFSPSASIENYYQEIGRAGRDGEESIAYLFWNDQELQEFDAILKNQIPTKVEY
QSILRYLYSIYQIAEHDLPEKMFTLKIDRVKNLSKTSRAKILNVLNFLHNQELIYYKNTW
SPSTIESLVQADNIDLLPAKDAHFLELLYRTVSGLGSGKVHFSEKSFCEKHHFDSGLFKE
RLEDMQKAGHLEYFDGANHAVRFLKPRDENRLFGFYWKLFSEIQQNKLKKWKQMKFYVTS
QDYCRMRLILRYFDEKNAKDCGKCDYCQKKSPIASNTLLNDILLQLTHQPRTLVELVAIF
KIHSREKILENLIFLLDLGKIRMLNYKTYTINS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgatagtcacttaacaaatatattacacgaaaatctccaaaaatattggggc
tattcgcagtttcgtgaagatcaggaagccattatttcttctgttgtacaagggcaagat
gttttggcattgttgccaacaggcggtggaaaatcgctttgttatcagttgcccgctatt
attttagaagggacttgtttggttatttcgccacttttagctttgataaaagatcaagtt
tcatctttagaagaactcggggtagaagcagaatttcttagttcagagtttgatgatgcc
gaagttgaagatgtcttcaccagatgtatcgaaggttttactaaagtcttgtacgtgtca
ccagaacgtctcaaaaatcaggagtttttacgacgaattccagagattaatatttcgttt
attgccgttgatgaagcgcattgtatttcagaatggggacaagattttcgaccaagttat
cagaatatcaaattctttcgagaagaatttaaaaatgtacctttgctggctttaaccgct
acggcaacctcagaagttgtggaagaaattgtcgccaagctttcgcttaaaaaagttcaa
atatttaaaaaaagttttgaacgcaacaatctcaatattatttcggtaaacatcaccgac
aaatatcaaaaaataaaagattttctccttcaaaatagaacagcaggaatcatctataca
agaacccgaaaagaagctgaagaactctctcattttcttcaaaattctggcttggagcag
gttaatttttatcatgctggacttccaagaaaagataaagaacgattgcagaaacaatgg
caagctagtcattctagagttctggtatcaacaaatgcttttggaatggggattgacaaa
gacaatgttcgatttgttattcatttttcaccatcggcttccatcgaaaattattatcaa
gaaattgggcgtgctggtcgagatggagaagagtcgattgcttatcttttctggaatgat
caggaacttcaggagtttgatgctattttaaaaaatcaaatcccgacaaaagttgagtat
caatcaattcttcgttatttgtattccatctaccaaattgcagaacatgatttgccagaa
aaaatgttcactttgaaaattgaccgtgtcaaaaatctaagcaaaacctcaagagcaaaa
atcctgaatgttcttaatttcttgcacaatcaagagcttatttattacaaaaatacctgg
agtccttcgacgattgagtctttggtacaagcagacaatatcgatttgttgcctgcaaaa
gacgctcattttttagaacttttgtatcgtacggtttctggtttaggatctggaaaagta
catttcagtgaaaaaagtttctgtgagaagcatcattttgattctgggctttttaaagaa
aggttagaagatatgcagaaagctggacatttagaatattttgacggagccaatcatgcg
gttcggtttttaaaaccaagagatgaaaatcgtttgttcggtttctattggaaattgttt
tcagaaattcaacagaacaaactgaaaaaatggaaacaaatgaagttttatgtaacgagc
caggattattgccgtatgaggcttattcttcgttattttgatgagaaaaatgcgaaagat
tgtggcaaatgtgattattgccaaaagaaatcgccaatagcatctaacacgcttctcaac
gatattttattacagttaacacaccaaccgagaactttggtagagttggttgctattttc
aaaattcactcgagagaaaaaatattagaaaatttaattttccttttagatttaggaaaa
atcagaatgttgaattacaaaacctatactataaattcataa
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