Chryseobacterium sp. POL2: G6R40_09065
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Entry
G6R40_09065 CDS
T11017
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrp Chryseobacterium sp. POL2
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrp03032
]
G6R40_09065 (topA)
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_09065 (topA)
Enzymes [BR:
chrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G6R40_09065 (topA)
DNA replication proteins [BR:
chrp03032
]
Prokaryotic type
DNA Topoisomerases
G6R40_09065 (topA)
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G6R40_09065 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QIG89801
UniProt:
A0A6G6YI36
LinkDB
All DBs
Position
complement(1947209..1949767)
Genome browser
AA seq
852 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLSNFTPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLAQELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVDAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IRNFTPTASFKVDAVFLNDSKQDIAARLKKDFAKESEAEQFLEQAKNTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTTTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
SQILSEYGKEYSSPRNYTTKSASAQEAHEAIRPTDFSVKSIGDAQLNKLYQLIYRRTLAS
QMANAKIEKTVIEIGNPSLPQHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNEKLLPKVK
VGEVLEYKSIVASEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVVRISLAKGNIKKEVLDEKFGGDKNKFVPTDIGEVVNDFLTSNFAEILDFGFT
ARVEQEFDDVANGGKEWKNLMTDFYGVFHPRIEDVEEHAERATGDRLLGIDPKSGKNVHA
RIGRFGAMIQIGEVEDEEKPIFASLMSGQNIATITLEEALELFKLPFDLNDFEGQGVTIG
VGRFGPYVKWGETYISIPKGEDPLSVNQERAEEIIREKQKADAPIASYKGEPVTKGTGRF
GPFIKYQSIFINVPKKYDFNNLSQNDIVELIEAKLEKEANRYIQQWEKEKIALENGRWGP
FIKFGKTNLKIPKRADGEKYDAEELKEIDLETVKAWIKEQDPKAFEEKKKAPAKKAAAKK
PAAKKTTTTKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatctagttatcgtagagtcacctgcaaaagcaaaaaccatccagaaatat
ctggggaaagatttcgaagttaaatctagcttcggtcacataagggatttgcctaaaaaa
gggatggggatagatttgagtaattttacgccagattacgaagtttctgccgataaaaag
aaattggtaacagaactgaaagccgcagttaaaaaagccgaaatggtttggttggcttcc
gatgaagaccgcgaaggagaagctattgcatggcatttggctcaagaattaaaattgaag
cccgaaaacagaaaaagaattgtttttcatgaaattaccaagaatgcaattttaaaagct
attgaaaatccacgcgatatcgatcaaaatttagtcgatgcacaacaagcaagacgtgtt
ttggatagaattgtaggtttcgaaatgtcacccgttctttggaaaaaagtaaaaccagga
ctttctgcgggtagagtacaatcggttgccgtaagacttgttgtggaaagagaaaaggaa
atccgaaattttactccaacggcgagtttcaaagtagatgctgtttttttgaatgattca
aaacaggatattgcagcaagacttaaaaaagatttcgctaaagaatctgaagcagaacaa
tttttagaacaagcaaaaaacaccgagtttaaagttctaaatgtagaaacaaaaccaggt
acgcgttcggcttcggcaccttttacaacatctacacttcagcaggaagcgtcttcaaga
ttgggttataatgtaaccacaaccatgcgtttagcgcaacgactttacgaagaaggtttt
ataacctatatgagaaccgactccgtgaatttatctcaagaagctatcgaaggcgctaaa
tctcaaattctatcagaatacggaaaagaatattcttctccaagaaattatactacaaaa
tctgcttctgcacaggaagctcacgaagctattcgtccaacagatttttctgtgaaaagt
attggcgatgcacagcttaataaattatatcaattgatttaccgtagaactttagcctct
cagatggcgaatgctaaaattgagaaaacggttatcgaaatcggaaatccaagtttgcca
caacattttgaagctcaaggagaagttattatttttgatggtttcttaaaagcttacggc
attgtaaaaacggaggatgatgacgaagaaaacaacgaaaaactgcttccaaaagtaaaa
gttggtgaagttttagagtataaatcaattgttgcttcggagaaatttacaagaccttct
gcaagatacacggaagcgggtttggtaagaaaactggaggaattgggcatcggtcgtcct
tctacttatgcaccaactatacaaacgattcagaatcgtgaatatgttgacaagcgtgag
atagagccacaaactagagaagttgtacgtatttctttagcgaaaggaaatattaaaaaa
gaagttcttgacgaaaaattcggtggcgataaaaataaattcgttcctacagatattggt
gaagtggtgaatgatttcctgacgtctaattttgcagaaatcctagattttggttttaca
gcaagagtggagcaagaatttgatgatgttgccaatggcggaaaagaatggaaaaactta
atgacagatttctacggtgttttccatccgagaattgaagatgttgaagaacatgcagaa
cgcgctactggagaccgtttgttaggaattgatcctaaatcgggtaaaaatgttcacgca
agaattggccgttttggagcgatgattcaaattggtgaagtggaagatgaagaaaaacca
attttcgcctcattgatgagtggtcaaaatatcgcaaccattactttagaagaggctttg
gaattgttcaaacttccttttgatcttaatgattttgaaggtcaaggtgtaactatcggt
gttggacgttttgggccttacgtgaaatggggcgaaacttatatttcaattccaaaaggt
gaagatccactatctgtaaatcaggagcgtgccgaagaaattattagagaaaagcaaaaa
gccgatgcgccaattgcgagttataaaggagaacctgtaaccaaaggaacgggaagattt
ggtccatttatcaaataccaatccattttcattaatgttcctaagaaatatgatttcaat
aatctttctcaaaacgatattgttgaattaatagaagctaaacttgaaaaagaagccaac
cgttatattcaacaatgggaaaaagagaaaatcgctcttgaaaacggacgttggggacca
tttattaaattcggaaaaaccaatcttaaaattccgaaaagagccgatggcgaaaaatac
gacgccgaagagcttaaagaaattgatttggaaactgtaaaagcatggattaaagaacaa
gatccaaaagcttttgaagaaaagaaaaaagctcctgctaaaaaagctgccgcaaaaaag
ccagcagctaaaaaaacgacaaccacgaaaaagaaataa
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