Chryseobacterium sp. POL2: G6R40_10475
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Entry
G6R40_10475 CDS
T11017
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03030
DNA replication
chrp03430
Mismatch repair
chrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G6R40_10475
03430 Mismatch repair
G6R40_10475
03440 Homologous recombination
G6R40_10475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrp03032
]
G6R40_10475
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_10475
Enzymes [BR:
chrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G6R40_10475
DNA replication proteins [BR:
chrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G6R40_10475
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G6R40_10475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Paxt-1_C
Motif
Other DBs
NCBI-ProteinID:
QIG90060
LinkDB
All DBs
Position
complement(2240616..2241842)
Genome browser
AA seq
408 aa
AA seq
DB search
MYSIVDIESNGGPYRKENIIEIAIYRYDGHEVVDQFISLVNPESDITSFVQKLTGISPNM
VKTAPKFHEIAKRIIEITQNSTLVGHNIEFDYRMLRQSFKRLGYDFKINTLDTIPLAKKL
IPEEKSYSLSKLCKSIGIPLSEAHRASGDARATLDLLKLLITKDKDHEIIQSQFEESKAI
NYTNKIKELTEDLPADKGIIYFQNKDGKIIFHDLVDNIYKVAKKVFNSNAKKYKAIQQNV
EQINYELTGNEVIAQLIMKTKNLSKVQKLGFGLFYQNGKYNVEKFTKESEPQPILKFKSY
TQGLKALSFLKHQEDLQDLVNLTQKINLKTRNEIWTSSGRQLGEKVFIVFEKGKLKGFGF
YELYHQIKTLDKIKKLMIPVSSVSPYLKNELQLSLLRGDFEIQVLPEK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtattccatagtagacatagaaagcaatggcggaccgtaccgcaaagaaaatataata
gaaatcgcaatataccgttacgatggccacgaagttgttgaccagttcatctcgttggta
aatccagaatctgacatcacctcttttgtacaaaaactgactggcatttctccaaatatg
gtgaaaacagctcctaaatttcatgaaatcgctaaacgaatcatcgaaattacccaaaat
tcaactttggtgggacataatatagagttcgattatcggatgttgcgccaatcttttaaa
agacttggatacgatttcaaaatcaatactttagacacaattcctttagccaaaaaacta
attcctgaagaaaaaagctactcattaagtaaactttgcaagtcgattggcattcctctt
tcggaagcccatcgtgcaagtggtgatgcgagagcgactttggacctacttaaattactg
attaccaaagacaaagaccacgaaataatccagtcgcaattcgaagaaagcaaagccatc
aattataccaacaaaatcaaggagttaaccgaagatcttccagctgacaaaggcattatt
tatttccaaaataaagacggcaaaatcattttccatgatttggtagataatatttacaaa
gttgccaaaaaagtctttaattccaatgcaaaaaaatacaaagccatacagcaaaacgtt
gagcaaattaattacgaactaactggtaacgaagttattgcacagcttatcatgaaaacc
aagaacttaagcaaagttcagaaattaggttttggtttattttatcaaaatggaaaatat
aatgttgagaaattcaccaaagaatctgaacctcaacctattttaaaattcaaaagctat
acacaaggccttaaggcattaagttttcttaaacatcaggaagatcttcaggatttagtt
aatttaacacagaaaattaatcttaaaacgcgcaacgaaatctggacttccagcggcaga
caattgggcgaaaaggttttcattgtttttgaaaagggaaaactaaaaggtttcggtttt
tatgaactctatcatcagattaaaacattggacaaaatcaaaaaactgatgattcccgtt
tcttctgtttcgccttatcttaaaaacgagttacaattatcccttttgcgtggcgatttt
gaaatccaagttttgccagaaaaataa
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