Chryseobacterium sp. POL2: G6R40_11315
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Entry
G6R40_11315 CDS
T11017
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chrp Chryseobacterium sp. POL2
Pathway
chrp03410
Base excision repair
chrp03430
Mismatch repair
chrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G6R40_11315 (recJ)
03430 Mismatch repair
G6R40_11315 (recJ)
03440 Homologous recombination
G6R40_11315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrp03400
]
G6R40_11315 (recJ)
DNA repair and recombination proteins [BR:
chrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G6R40_11315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G6R40_11315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G6R40_11315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ALKBH8_N
Motif
Other DBs
NCBI-ProteinID:
QIG90215
LinkDB
All DBs
Position
complement(2436780..2438486)
Genome browser
AA seq
568 aa
AA seq
DB search
MSQKWIYKPEPDEDIVDGLISSIGFGTLESKLLVLRDIDNYQSAREFFKPNGGDIHNPFL
MADMQKAVERIATAIENGEKMMVYGDYDVDGTTSVALMYLYLSKIVDKKYLDFYIPDRNV
EGYGISNEGIDFAKENGFSLIIALDCGIKSVDKIEYANKLGVDFIICDHHLPGDQIPKAV
AVLDPKRKDCRYPYKELSGCGVGFKLCQGLNTIYKIPESELFELTDLLAISIASDIVALT
GENRVLAKQGLKFLRKTRKFGLRLLIPEEKLAHFEISNIVFDIAPKINAAGRISHAKAAV
ELMISDNLKQAQQIVDNIINLNDERREMDHNITQSAMNQVLESSQDTLSTIVYDPSWNKG
VIGIVASRLIESHFKPTLVFTDGNNGEMVASARSVSDFDIHEALDYCSELFLKFGGHQAA
AGLSMEKENFEVFKIMFEGYVRDHIQEHQKEPSIYVDSVINIDDLNREFYNFHRKLAPFG
PKNMKPVLVLKDVKVAGYVRLMGKDGNHLKFFIHQPSTNRNIECIGFKLGEFANDFRNKS
FDMAFTVEENHWKGNVSYFLNIRDVSFH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatggatttataaaccagaacccgacgaagacattgtagacggtctcatt
tcctcgattggatttggaactttggaatccaaacttctcgtcttgcgcgacattgacaac
taccaaagtgcgcgtgagtttttcaaacctaatggtggtgacatccataatccattcctg
atggccgacatgcaaaaagctgtcgagcgtattgctacagcaatagaaaatggtgaaaaa
atgatggtctatggcgattacgatgtggacggaacaacttctgtcgcgctcatgtatctt
tatctgagcaaaatcgtggacaaaaaatatcttgatttctatattccagatcgtaatgtt
gaaggctacggcatttctaatgaaggtattgactttgccaaagaaaatggcttcagctta
ataatcgccttggattgtggtataaaatcagtagataaaattgaatatgccaacaaacta
ggtgttgattttatcatttgcgatcaccacttacccggcgaccaaataccaaaggctgtt
gcggttttggaccccaaacgtaaagattgtcgctatccttataaagagttaagcggctgt
ggtgttggtttcaaactttgccaaggtcttaataccatctataaaattccggaaagtgaa
ttgtttgaactaaccgatcttttggcaattagtattgcatcagatattgtggcactaact
ggagagaatcgtgtattagcaaaacaaggattaaaattccttcgtaaaacgagaaaattc
ggtttgcgattattaataccggaagaaaaactggcacatttcgaaatttcaaatattgtt
tttgatatcgcgccaaaaataaatgctgcaggaagaatttctcatgcaaaagcggctgta
gaacttatgatttctgataatctgaaacaagcacagcaaattgttgataacatcatcaac
ctaaatgatgagcgccgcgagatggatcataacattacacaatcggcgatgaatcaggtt
ttggaatcttcacaagacacactttctacaattgtctatgatccttcttggaacaaaggc
gttatcggaattgtcgcatctcgacttatagaaagtcatttcaaaccgactttggttttc
accgatgggaacaatggtgagatggtcgcttcagcgcgttctgtatcggattttgacatt
catgaagctttggattattgctccgaattatttctgaaatttggcggacatcaggctgct
gcaggcttatccatggaaaaggaaaattttgaagtttttaaaatcatgttcgaaggttat
gttcgggatcacattcaggagcatcaaaaagagccgtcgatctatgtcgatagcgttatt
aatattgatgatctaaaccgagaattctacaatttccatagaaaattagcgccttttggg
cctaaaaacatgaagccagttttggtgttaaaagatgtgaaagtggctggttatgttaga
ttaatgggaaaagatggcaatcatttgaagttcttcattcatcaaccaagtaccaacaga
aatattgaatgcatcggcttcaaacttggagaatttgctaatgattttagaaataaatct
tttgatatggccttcacagtggaagaaaatcattggaaaggtaatgtatcatatttctta
aatatccgtgacgtttcgtttcattaa
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