Chryseobacterium sp. PMSZPI: ACL0VS_08000
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Entry
ACL0VS_08000 CDS
T11402
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
chrr Chryseobacterium sp. PMSZPI
Brite
KEGG Orthology (KO) [BR:
chrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrr03016
]
ACL0VS_08000
Enzymes [BR:
chrr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACL0VS_08000
Transfer RNA biogenesis [BR:
chrr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACL0VS_08000
Prokaryotic type
tRNA splicing ligases
ACL0VS_08000
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNN39835
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Position
complement(1882205..1883596)
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKLGYPNNQSVNVALEVMKRNFATKNIHHVKSILKEILINPENFEKDLT
FGQIAETLLSSKKTEKRMLNSQRVSFQIFGNNISEEAKNQLYTALKLPISTQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDTPVSYLNGARDKYEKALAEHTKFG
MYETHKSHIDHEIFDRDTFDLIPILRRLKGKAIKQMGSSGGGNHFVEFGEVEITEEDEQI
GLPKGKYLGILSHSGSRGLGAEVAQYYSRVAVEQCPLPKEAQQFAWLDLNTHLGLEYWTA
MNLAGDYASACHDDIHRRLVKAVGGRVKARIENHHNFAWKEIHNGKEVIVHRKGATPANE
NELGMIPGSMTAKGFIVRGKGNSDSLNSASHGAGRAHSRGECRSLFTQNDIKKELKLKNV
TLMGGNAEEAPMAYKDIHEVMNAQSELVDILGTFQPRIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaactaaaaggaaaagatatattaaaactgggctatccaaacaatcag
agtgttaatgttgctttggaagtcatgaaaagaaattttgccaccaaaaatatccatcac
gtaaaatctattttaaaagaaatcctgatcaatccggagaattttgaaaaagacttaacc
ttcgggcagatcgcagaaacattgctttcttcaaaaaagacagaaaaaagaatgctgaat
tcacagcgtgtctcttttcagatctttggaaacaatatttcagaagaagcaaaaaaccag
ttgtacaccgcactgaaattgccgatttctacacaaggtgctttaatgcctgatgcacac
agcggatatgggttgcctatcggaggcgtacttgctgtagaaaatgcagtcattccttac
ggagtaggcatggatatcggttgcagaatgagcctcagtattttggatacgccggtttca
tatctcaacggagcaagggataaatatgaaaaagcccttgcagaacatacaaaattcgga
atgtacgagacccataaatctcacatagaccatgagatcttcgacagagatacctttgat
ctcattccaattttgagaaggttaaaaggtaaagccattaagcaaatgggttcttccggt
ggtggaaatcacttcgtagaattcggggaagtagaaatcaccgaagaagatgaacagata
ggtcttccgaaagggaaatatttgggaatcctttctcacagcggctccagagggctggga
gcagaggttgcccaatattattccagagtagctgtagagcaatgtccattaccaaaagaa
gcgcaacagtttgcctggctggatttgaatacacatcttgggctggaatattggacagcc
atgaatcttgcaggagattacgcttctgcctgtcatgatgatatacacagaagattagtg
aaagctgtcggagggagagtgaaggcgagaatagagaaccatcacaattttgcatggaag
gaaatccataacgggaaagaagtgattgttcatcgaaaaggagcaacaccggctaatgaa
aatgaattgggaatgattcccggatcgatgacggcaaaaggctttatcgtccgtggaaaa
ggcaattctgattccctgaattctgcatcgcatggagcaggaagagcccactcaagagga
gaatgcagaagcctgttcactcaaaatgacattaaaaaagaattgaaattaaaaaatgtc
accttgatgggcggaaatgcagaagaggcaccaatggcttataaagatattcatgaagtg
atgaacgcacaaagtgaactggtagacatccttggaacatttcaaccgagaattgtgaga
atggataagtaa
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